Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0134 ATGGGGAGACCTCCATGCTGTGAGAAGATAGGGGTGAAGAAAGGACCATGGACTCCTGAAGAAGACATCGTCCTCGTCTCCTACATCCAACAACACGGTCCCGGCAACTGGAGATCCGTTCCCACCAATACCGGTTTGATGAGATGCAGCAAAAGCTGCCGTCTCCGATGGACTAACTACCTCCGACCGGGCATCAAACGCGGCAACTTCACCCAACACGAAGAGAAGATGATCATCCACCTTCAAGCTCTCCTCGGTAACAGGTGGGCGGCCATCGCTTCATACCTTCCACAAAGAACAGACAATGACATCAAGAATTACTGGAACACACATCTGAAAAAGAAGCTCATGATGAACAACAAGGGAGCACCAAATGGTGGCATAGAAGGTTCCAATAACGACCAAGAAGACAACGGAAATAATGGATACTTGTCATCATCATCCTCACAACCAAACAAGGGACAATGGGAAAGAAGGCTCCAAACTGACATCCAAATGGCCAAACAAGCCCTATGTGAAGCCCTCTCCATTGACAAACCCTATCCTTCAACACTAAATCACCATTTCCCCATCATCCATGACACAAAATCACCAGACCAACCACAAACAATAGTATCATCATCATCTCCTTCATCATATGCTTCAAGTGCTGATAACATAGCTCGCCTCCTGCAAAGCTGGATGGCGAAGAAGACGCCGGCGATAAACTCGGCCTCCAGTTCGACTTCAAGCGAGGGAGCACATAGTGGGAGTGGTACTACTACTACAACACCAGATCAAGTCTTTGATTATAGCTCTCTCTTGAGCTCTAGCAATATGAACAACAACAATGCGTCTGATGTGTCCATAGAGGGTAATAATAATAATAATAATAGCCTCTTATTTCAGCAAGAAGAAAGCAAGACAAGTATTAATTTGGATAATCATCATCATCAAAATCAAAATCATGTGCCTTTCACGCTTCTGGAGAATTGGCTGTTTGATGATGCTGCAGCTTCACAAGTAGGGCATGAAGAAGATTTGTTGACCATGTCTTCTCTTCAGGAAACTACGGTTGACCTGTTTCACACTCACTTGGCCAAGCACAAATTCTAG 1095 0.4521 MGRPPCCEKIGVKKGPWTPEEDIVLVSYIQQHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTQHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLMMNNKGAPNGGIEGSNNDQEDNGNNGYLSSSSSQPNKGQWERRLQTDIQMAKQALCEALSIDKPYPSTLNHHFPIIHDTKSPDQPQTIVSSSSPSSYASSADNIARLLQSWMAKKTPAINSASSSTSSEGAHSGSGTTTTTPDQVFDYSSLLSSSNMNNNNASDVSIEGNNNNNNSLLFQQEESKTSINLDNHHHQNQNHVPFTLLENWLFDDAAASQVGHEEDLLTMSSLQETTVDLFHTHLAKHKF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0134 364 MobiDBLite consensus disorder prediction 196 214 - -
Mibi09g0134 364 MobiDBLite consensus disorder prediction 125 156 - -
Mibi09g0134 364 MobiDBLite consensus disorder prediction 235 260 - -
Mibi09g0134 364 Gene3D - 13 66 - -
Mibi09g0134 364 SMART sant 66 114 IPR001005 -
Mibi09g0134 364 SMART sant 13 63 IPR001005 -
Mibi09g0134 364 MobiDBLite consensus disorder prediction 191 214 - -
Mibi09g0134 364 FunFam MYB-related transcription factor 13 66 - -
Mibi09g0134 364 MobiDBLite consensus disorder prediction 118 156 - -
Mibi09g0134 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi09g0134 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 277 - -
Mibi09g0134 364 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi09g0134 364 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi09g0134 364 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi09g0134 364 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi09g0134 364 CDD SANT 16 61 IPR001005 -
Mibi09g0134 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi09g0134 364 CDD SANT 69 112 IPR001005 -
Mibi09g0134 364 Gene3D - 68 140 - -
Mibi09g0134 364 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0134 Mibi-ChrMibi09 1782441 1784156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0134 1 336 MYB Transcription Factor Family AT5G62470 50.824 8.23e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g0134 Myb_DNA-binding 7.9e-14 CL0123