Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0133 ATGCTCCTAAACAAATTAAACCAGAGACCACCAACAAAAGTGTTACTGATCACAGAGAGAGAGAGGGGGGGAGAGAGAGAGAGAGAGAGGATGAAGAAGGTGGTGATTACAAAAGTTGAAAACACAGTGGCTAGAAGCATTAGATATGGAGAGTGTCAGAAGAATCATGCAGCTTCCATGGGAGGTTATGCTGTGGATGGTTGCAGAGAATTCATGGCTAGCTCCGGCGAAGGCACTAGTGGGGCCCTCACTTGTGCTGCTTGTGGCTGCCACCGTAGTTTCCACCGAAGACAAGAACAATTCGTCGTCGACGAGGGTCATCGTCTTGTTTGTTTTGTAATGTATGAAGAGAGGCCAATCAAAACCACTGGATATGGAGGATGA 384 0.4714 MLLNKLNQRPPTKVLLITERERGGERERERMKKVVITKVENTVARSIRYGECQKNHAASMGGYAVDGCREFMASSGEGTSGALTCAACGCHRSFHRRQEQFVVDEGHRLVCFVMYEERPIKTTGYGG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0133 127 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 48 98 IPR006456 -
Mibi09g0133 127 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 49 98 IPR006456 -
Mibi09g0133 127 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 99 - -
Mibi09g0133 127 Pfam ZF-HD protein dimerisation region 47 99 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0133 Mibi-ChrMibi09 1756830 1758990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0133 45 98 Zinc finger-homeobox gene family AT3G28917 83.636 9.99e-29 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi09g0133 ZF-HD_dimer 2.7e-29 No_clan