Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0124 ATGCCGGAAACAAAAGACCCTGCTATTAAGCTCTTTGGAAAGAAGATTCCTTTGCAGGGTGAAGCCCACGATCCTGCCATTGATGCTGAGAAAGGAGGACAGAAAAAACGACAAGATGTTGAAACAGACAAGGAATCTCAAATTGAAAAATTCACAGAGAGCCCTGAAGAGAAAGAGACAGGAGAAACTGAAAACTCTTCAAAGGATGAAGGTGGAACAAACTCGGAGGAGAAAATCCGGAAGAAGCCAGATCAAGTGATTCCATGTCCTAGATGCGACAGCAAGAACACAAAGTTCTGTTACTACAATAACTACAACATCAATCAGCCTCGCCATTTCTGCAAATCCTGTCAACGATACTGGACAGAAGGTGGCACCATGAGGAACGTTCCAGTAGGGGCAGGACGACGAAAGACCAAAAATCACTCCTCTCATTATCCATACATCACCATTAATGAAGCTCTTCGAGTAGCCAGAATCAGTGCTCCCAATAACGGAACTCATGGTAAAGTTCTCAGCTTTGGATCAGATTCACCCATGCGTTCTTTCCTGAATCTTCCAGAGAACAAAATTGTTCCTAAAAGTACCCGAAACACATCTTCCATGGAAGAAATCAAGAAAAACACCCTTCAAATCCCATGGAGTTCGAATATTCCTGTGTTTTCCACTAAAATGTCATCTCCAACCTTAAATTCTCCGATGTTGGGAAAGCATGCGAGGGATGGAGACATGGTTGAGACGGGGTATGTTCAGAGAGAAGAAGTGTGGAAACAGAGGAATGGCTCTGTTTTGGTGCCTAAAACTTTGAGGATTGATGACCCAAGTGAGGCTGCTAAGAGTTCAATATGGAAAACATTAGGAATAAAGAAGGAATCATTGAAGGGTGGAAGCATGTTTGAGGCGTTTCAATCGAGTAAAGATGGGAAGAATCAGAAACATCACAGAGTTGAAACATGTTCAGTGTTAAGAGCCAACCCAGCAGCATTGTCTAGATCCGTTTACTTTCATGAGAACACATAA 1020 0.4265 MPETKDPAIKLFGKKIPLQGEAHDPAIDAEKGGQKKRQDVETDKESQIEKFTESPEEKETGETENSSKDEGGTNSEEKIRKKPDQVIPCPRCDSKNTKFCYYNNYNINQPRHFCKSCQRYWTEGGTMRNVPVGAGRRKTKNHSSHYPYITINEALRVARISAPNNGTHGKVLSFGSDSPMRSFLNLPENKIVPKSTRNTSSMEEIKKNTLQIPWSSNIPVFSTKMSSPTLNSPMLGKHARDGDMVETGYVQREEVWKQRNGSVLVPKTLRIDDPSEAAKSSIWKTLGIKKESLKGGSMFEAFQSSKDGKNQKHHRVETCSVLRANPAALSRSVYFHENT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0124 339 MobiDBLite consensus disorder prediction 24 87 - -
Mibi09g0124 339 PANTHER CYCLIC DOF FACTOR 2 4 339 IPR045174 GO:0003700|GO:0006355
Mibi09g0124 339 ProSitePatterns Zinc finger Dof-type signature. 89 125 IPR003851 GO:0003677|GO:0006355
Mibi09g0124 339 Pfam Dof domain, zinc finger 84 141 IPR003851 GO:0003677|GO:0006355
Mibi09g0124 339 MobiDBLite consensus disorder prediction 1 87 - -
Mibi09g0124 339 ProSiteProfiles Zinc finger Dof-type profile. 87 141 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0124 Mibi-ChrMibi09 1691272 1692819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0124 1 337 C2C2-Dof Transcription Factor Family AT5G62430 44.693 2.49e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi09g0124 zf-Dof 4.4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0634 12 16095087 16097211 Mibi09g0124 09 1691272 1692819 CCT
Mibi09g0124 09 1691272 1692819 Mibi13g0714 13 9274342 9276929 ECH
Mibi09g0124 09 1691272 1692819 Mibi09g0124 09 1691272 1692819 ECH