Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0119 ATGATCATTCGTGCTTGCACAATGGTCCATTTGATCCCTCTTCTTTATATTCTTCTCTTTTCGCTTTTTCCTTTTGCAATTGGATCTGTATATGAGATGTTTGTTTCTCTCCAATCTGTGCGAGGAGAAATGACTGGTGATCTCAAGAGTCTGCATATAAGAAAACTGTCCAAAGAATTTCTGAATCAAAGCTTTTTTATTAAGATGGAGAACATTTCTGAGCTGTTCAACAAGGAAGAAGTGCAACTGAATTTGCCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTAATCACTTACTATATGTACAAGAAGGTCGTTGATGCCAACTTCTCTGCAATAGCCATTGCGGAAGTGGATATACACAAGTTTAAGCCTTGGGATTTGCCATGGAAGGCGAAAATGGGAGAGAACGAGTGGTATTTTTACTGCTTGAGAGACAATAAATACCAAACTGGCTTGAGAACTAATAGATCCACTGAAGCTGGGTACTGGAAGTCCACAGGGAAAGATGGGCAGATTTACAGAGGAAAATATCTGATAGGGAAGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCACCAACAGGAGAAAAAACCAACTGGGTCATGCATGAATACAGATTAGATGGAAAATCATCTGTCCAAAACTCCTCCAGAACTATAAAGAATGAGTGGGTGATTTGCAGGGTGTTTCGTAAGACTTTACGTGGCAAAAAAACCCACATTTCTGATATAAAGGGGGATGAATCCATTGGAAATGGATTGGATTCTTCTTCAGTGTCACTTTCACCACCTGTCATAGGTTGTTCTCCTAATTTCATGGGCTCAATCGAACATAGTACGTTAAGTAATGATTCAGCACATGTGCCCTGCTTCTCCTCTATGTTATGTGATGATGGAAACGACCAAGCTGGGATTTTTAATTCTGCAGGAAACTCCCTTTTGGGGATTTGCTCAAATCCTCAAGAACTTTTGCCAAGAATCCCTCTTCAGGGTGGGTTGTATTCTTCTGAAACCATTCAAGCTCCCATGAATCTGCCATTACTACCAGATTCTTCTTTGACTCAGCAGGAACAGAACCTCCTTTATGGTGTTTTTGATAACCAAGGTTTTATGTCAGAGATGGAGAAAATTGTGAGTGCTTCGCATGAAACGAATCCCACCAACACTGACATGATGAATCCGGAGATTTCTCCTGCGATACGTTTTGGTAATCAGCAAAGCCCATCTGCTTCTTCTGCAACATCATTGGACCTTGATAGCTTCTGGAATTATTAG 1284 0.4081 MIIRACTMVHLIPLLYILLFSLFPFAIGSVYEMFVSLQSVRGEMTGDLKSLHIRKLSKEFLNQSFFIKMENISELFNKEEVQLNLPPGFRFHPTDEELITYYMYKKVVDANFSAIAIAEVDIHKFKPWDLPWKAKMGENEWYFYCLRDNKYQTGLRTNRSTEAGYWKSTGKDGQIYRGKYLIGKKKTLVFYKGRAPTGEKTNWVMHEYRLDGKSSVQNSSRTIKNEWVICRVFRKTLRGKKTHISDIKGDESIGNGLDSSSVSLSPPVIGCSPNFMGSIEHSTLSNDSAHVPCFSSMLCDDGNDQAGIFNSAGNSLLGICSNPQELLPRIPLQGGLYSSETIQAPMNLPLLPDSSLTQQEQNLLYGVFDNQGFMSEMEKIVSASHETNPTNTDMMNPEISPAIRFGNQQSPSASSATSLDLDSFWNY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0119 427 FunFam NAC domain-containing protein 100-like 94 239 - -
Mibi09g0119 427 ProSiteProfiles NAC domain profile. 85 235 IPR003441 GO:0003677|GO:0006355
Mibi09g0119 427 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 84 339 - -
Mibi09g0119 427 SUPERFAMILY NAC domain 80 235 IPR036093 GO:0003677|GO:0006355
Mibi09g0119 427 Pfam No apical meristem (NAM) protein 86 210 IPR003441 GO:0003677|GO:0006355
Mibi09g0119 427 Gene3D NAC domain 94 238 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0119 Mibi-ChrMibi09 1645827 1652118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0119 83 427 NAC Transcription Factor Family AT5G07680 48.711 3.03e-99 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi09g0119 NAM 4.5e-36 No_clan