Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0118 ATGGAGAACATTTGTGTTGTGCATAACAAGGACGAAGATCGCATGGATTTGCCTCCTGGCTTTAGGTTTCACCCAACAGATGAAGAACTTATCACTCATTATCTGTTCAACAAGGTCACTCTCACAAACTTCTCTTCTATAGCCATTGGAGAAGTGGATTTGAACAAGTCTGAACCTTGGGATTTGCCAAGGAAAGCAAAAATGGGAGAGAAAGATTGGTACTTTTTCTGCGTGAGAGACAAAAAATACCCCACTGGTTTAAGAACAAACAGAGCTACTGAAGCAGGGTACTGGAAGGCTACTGGGAAAGACAGAGAGATTCACAGAGGAAAATCTCTGGTAGGGATGAAGAAAACTTTGGTTTTTTACAGAGGAAGAGCACCAAAAGGAGAAAAAACAGATTGGGTCATGCATGAATTCAGATTAGATGGTGAATTCTGTGTCCATAATCTCCCCAAAACTGGAAAGAACGAGTGGGTTGTTTGTAGGGTGTTTAAGAAGAATTCTAGTGGCAAGAAAACTCTTATGTCTTCTATAATGAAGTTTGAAGTTGAATCCACTAGAAATGGATTGGATTCCTCAGTTTCATTACAACCTCTCACAGATTCTTCTCATGTCATTTGCAAAAGTGAACCCAACATGACTGAATCTTCATGCGTGTCCTGCTTCTCCATTACAAGCGATGATCAAAGAAACCAAAAAGGGATCTTTGATTCCTTTAGAAACTCCCTCTTGGGGATTCCTTCAAATCCTCCTCAAATTCTGCCAAGAATTCCTCTTTCTGGATCATTGTATTCTGCTATACCTTTTCATGCCCCAACAAAAATCCGTTTTTCTGGATCAAACTTGATGAGGAATGATTTTAGCATCAAGGGAGAACAAATTTTGAGTCTTTCTCAAGAAACGGGTCTTATCACTGATATGAATTCTGAATTTTCTTCTATGATGATGAGATCAAGCTTTGAGAACCAGCAAAACCTCTCTGCTTCTGATAGCTTGTGGAATTACTAA 1011 0.3937 MENICVVHNKDEDRMDLPPGFRFHPTDEELITHYLFNKVTLTNFSSIAIGEVDLNKSEPWDLPRKAKMGEKDWYFFCVRDKKYPTGLRTNRATEAGYWKATGKDREIHRGKSLVGMKKTLVFYRGRAPKGEKTDWVMHEFRLDGEFCVHNLPKTGKNEWVVCRVFKKNSSGKKTLMSSIMKFEVESTRNGLDSSVSLQPLTDSSHVICKSEPNMTESSCVSCFSITSDDQRNQKGIFDSFRNSLLGIPSNPPQILPRIPLSGSLYSAIPFHAPTKIRFSGSNLMRNDFSIKGEQILSLSQETGLITDMNSEFSSMMMRSSFENQQNLSASDSLWNY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0118 336 FunFam NAC domain-containing protein 100-like 26 171 - -
Mibi09g0118 336 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Mibi09g0118 336 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Mibi09g0118 336 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
Mibi09g0118 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 229 - -
Mibi09g0118 336 SUPERFAMILY NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0118 Mibi-ChrMibi09 1638124 1639325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0118 15 336 NAC Transcription Factor Family AT5G07680 52.770 2.04e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi09g0118 NAM 1.5e-38 No_clan