Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0105 ATGGAGATTGGAGGCCTTGATTTGAACAAAGTCTATGCTAATGCTGGAAATCATAGCAAGAGGACTGATGATTTCATTGATCGAAGCAAGGTGAAAATATTGTTGTGTGATAATGATAATAAGAGTTCCGAAGAGGTTTTAACGCTTCTATCTGGATGTTCTTATCAAGTTACTTCAGTAAACTCGCCGAGGCAGGTAATTGATGTGCTGAATGCAGAGGCGCAAGATATTGATATCATACTTACTGAAGTTGACCTTCCAATGAAGAAGGGCATGAAGATGTTGAAGTACATTGCACGAAACAAAGATTTGCATCGAATTCCTGTTATAATGATGTCGGCACACGATGAGGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCTGCAGACTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTCGGTTTGACAGAGAAGAACATAATGAACTATAATTTTGATCTGGTAGCATCAGCCATAATGAACTATGATTCTGATCTAGTAGCATCAGACCCTGGAGATGGTGCTACAACTAGTACCGCCTTATTCTCGGATGATACAGAAGACAAATCCAAAAGAAGCATTAATCCGGAGACAGGAATGTCAATCCGGCAGCAAGATGAGTCTACAGTTGCTGCTGCTTCTGCTACTCTTGAGGAGCCTCCTGGAACTCATGCATCAGATTGTTGGCCTGATGTGCCCGGAATTAGTGATCGCCAGACAAGACACTGTTCTACAGGACCAAAGAAGAGTGGACTAAGGATTGGGGAGTCATCGGCCTTCTTTAGTTATGTTAAAACAACCGTGCAAAAGAGCAACTTACAAGCGATTCCTCAAGTTCATAATAATGCTGCTACACAACTTAAGATGAAAGACATGCATCAAACTTGTCCCCAACGGGTTCATGACCTTCAAACATTTGAAACTGGAGAGCCAAGTGAGAGGCCTAATAAAGATGATTTACCCAGCAGCATTAGCAATCCTAATTCTTTCTCCATTGACAATTCTTCTGCTCCACCCGCATCCATGGGAATTCTAAATCATAAGAGCTTCAATGAAGAACATTCACCACAGGATGTCATCCATCTTAGAAATGGAAGTCATATCTCTGAGACTCAACTATCAGGTACTTCTTCCCAACATGCTCATCTATATTATATGTCTGGGTTCTTCAATCACCTTCTGATGCCATCCTCAGCGCCAATGTATCCTAAGAATCATCAGGATTCACAGAATCATACTAGTGCACCTATGATTGCACAGTACAATGATAATTCCCATCGTCCTGAGGTGAAAGGTATAACTCCCTTCCCATATTACCCAATGACTGTATGCTTACAACCTGGTCAGATGTCCTCAGCTCATTCACATGGGCCATCGCTTGGAAGTTCAAGTTCATCCAAAGAAAAACAAAATATAGTTGATAGAAGAGCAGAAGCATTGATGAAGTTTAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAAATCAGGTATGTCAACCGAAAGCAGCTTGCTGAAAGGCGGCCTCGCGTGAGGGGACAGTTTGTGAAAAAAATAAATGGAGTCAATGTTGATCTCAATGGACAACCTGCAGCTTCCATAGACTATGATGAAGAGGAGGAGGACGAAGATGATGAAGAGGACAATGTGAGAGATTCAACTCCTGAAGGTGCATGA 1725 0.4151 MEIGGLDLNKVYANAGNHSKRTDDFIDRSKVKILLCDNDNKSSEEVLTLLSGCSYQVTSVNSPRQVIDVLNAEAQDIDIILTEVDLPMKKGMKMLKYIARNKDLHRIPVIMMSAHDEVSIVMKCLRLGAADYLIKPLRSNELLNLWTHMWRRRRMLGLTEKNIMNYNFDLVASAIMNYDSDLVASDPGDGATTSTALFSDDTEDKSKRSINPETGMSIRQQDESTVAAASATLEEPPGTHASDCWPDVPGISDRQTRHCSTGPKKSGLRIGESSAFFSYVKTTVQKSNLQAIPQVHNNAATQLKMKDMHQTCPQRVHDLQTFETGEPSERPNKDDLPSSISNPNSFSIDNSSAPPASMGILNHKSFNEEHSPQDVIHLRNGSHISETQLSGTSSQHAHLYYMSGFFNHLLMPSSAPMYPKNHQDSQNHTSAPMIAQYNDNSHRPEVKGITPFPYYPMTVCLQPGQMSSAHSHGPSLGSSSSSKEKQNIVDRRAEALMKFRKKRKERCFDKKIRYVNRKQLAERRPRVRGQFVKKINGVNVDLNGQPAASIDYDEEEEDEDDEEDNVRDSTPEGA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0105 574 Gene3D - 31 243 - -
Mibi09g0105 574 MobiDBLite consensus disorder prediction 465 488 - -
Mibi09g0105 574 MobiDBLite consensus disorder prediction 334 357 - -
Mibi09g0105 574 SMART REC_2 31 146 IPR001789 GO:0000160
Mibi09g0105 574 MobiDBLite consensus disorder prediction 465 484 - -
Mibi09g0105 574 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Mibi09g0105 574 MobiDBLite consensus disorder prediction 542 574 - -
Mibi09g0105 574 MobiDBLite consensus disorder prediction 322 357 - -
Mibi09g0105 574 SUPERFAMILY CheY-like 29 157 IPR011006 -
Mibi09g0105 574 MobiDBLite consensus disorder prediction 550 567 - -
Mibi09g0105 574 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 296 IPR045279 GO:0009736
Mibi09g0105 574 MobiDBLite consensus disorder prediction 193 216 - -
Mibi09g0105 574 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Mibi09g0105 574 Pfam CCT motif 492 534 IPR010402 GO:0005515
Mibi09g0105 574 ProSiteProfiles CCT domain profile. 492 534 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0105 Mibi-ChrMibi09 1554809 1559103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0105 20 572 Response Regulator Gene Family AT5G61380 45.498 3.75e-147 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi09g0105 Response_reg 8.2e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0105 09 1554809 1559103 Mibi09g0105 09 1554809 1559103 ECH