Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0098 ATGGGTTGTGTGAATGCGAAGCAGGCGGTGTCGGTGACGCCTGCGATTGACTACTCCGGTGTGCTACGTGGCAATGCGGGAACGGGGAATTCGGGGAGGAAAATGGGAGAGTCGGAGAATAAGAAGAAGAAGAAGAAGAAGAGTAGTGGTGAGTCAGTGAGCGAGTTGGGTGAGTCAGGAAGGGCGAGTTCAAATGGAGGAGGTTGTGACTCTTATAGTTTCAGATTGGGGAATCTGCAAAAGTATGTAGAAGGAGAGCAAGTAGCAGCTGGTTGGCCTGGTTGGCTTACCGCCGTTGCTGGTGAAGCCATTCAAGGTTGGGTCCCACTAAAAGCTGATGCTTTTGAGAAACTTGAGAAGATTGGACAAGGAACATACAGCAGTGTCTTCCGAGCGAGGGAACTTGAGACGGGGAAGATAGTTGCTCTGAAGAAGGTGCGGTTTGACAACTTTGAGCCCGAAAGTGTTAGGTTCATGGCTCGAGAAATAATGATTCTCAGAAGGCTTGATCATCCAAACATTATAAAATTGGAGGGCTTGATTACTTCCAAATTGTCCTGTAGCATATATCTTGTATTCGAGTATATGGAACATGACATTACAGGGCTCTTATCTTCCCCTGATATCAAGTTTAGTGAGCCGCAGATTAAATGCTACATGAAGCAGTTGTTATCTGGACTTGACCATTGTCATTCACGAGGAGTAATGCACCGTGACATCAAGGGATCTAATCTTCTAGTGAATAATGATGGGATACTGAAGGTAGCTGATTTTGGACTGGCGAACTTCTCAAATCCTGGGCACAAACAGCCCCTCACTAGTCGTGTAGTTACATTGTGGTACCGTCCTCCTGAACTTTTACTGGGTTCAACTGACTATGGTCCTTCTGTGGATCTCTGGAGCATTGGCTGTGTATTTGCTGAATTACTTGTCGGGAAGCCTATCCTTCAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTATGTGGCTCTCCACCTGAAGAATACTGGAAAAAGTCTAAACTCCCTCATGCAACGTTGTTTAGGCCACAGCAACCTTATAATAGTTGTCTCCGTGAAACCTTTAAAGATCTGCCTCCAACTAGTGTGAACTTGCTGCAGACTCTTCTTTCCATTGAACCATACAAACGTGGAACTGCCTCCTCTGCTCTCTCATCAGAGTATTTCAAAACAAAGCCACACGCTTGTGAACCATCAAGCTTGCCGGTATACCCACCTAGCAAGGAGATCGATGTGAAACAACGGGAGGAATCAAGGAGGAAAAAGGTTGGTGGAAGAGCACGTGGACCTGAAACAAGGAAACCATCAAGAAAGCCATCAGGATTCAACAAGCTAGTCCCAGCAGAGGATTTGGCAAGTCAAACCCAGAAATTCCAAAGGGTAAATAGCAGGTCATTCAACATCCTTAAAGAAGGGAGCATCAATGCGGGAAAAGAGGAACCAAAGCCATCTAGTGGTAAACCAAATGATGCCTCACATACTAAGAATGCATCTCAAGAAGATATTCCCTTTTCTGGGCCATTGCAAGTTTCCACATCAAGTGGCTTTGCATGGGCAAAAAGACGGAAAGATGACATTTCAATAAGATCCCACTGTCGATCTATTTCAAGGGGGCATATTGTCAACCCATTAGAGTCTTCTGTACCAAATTCAATGAATAGCTTCGATTCCAGAAACATGGAAAATAAGGATTGTCTGGGACGCTCCAACTCTCGGAGTCATGATCCACTTGAGATCCCTAAGCTTTCCATGCAAAATCAATGGAGCAAGTTTGATCGCCCAAATTCTTTTGACGCTTCTGACGAATACCACTCACAGGAGCTATCTATGGCCCTATATCATAGGGATGATTCAATATCCAAGAGAAGTAACCTGGATCAAGCAGAGAAGGTTGAGTTTTCAGGACCCCTGCTATCTCAAATGCATACTGTTGATGAGCTCTTGGAAAAACATGAGCGCCACATCCGCCAAACAGTCCGAAGATCTTGGTTTCAAAGAGGTGGGACAGCTAAATGA 2046 0.4506 MGCVNAKQAVSVTPAIDYSGVLRGNAGTGNSGRKMGESENKKKKKKKSSGESVSELGESGRASSNGGGCDSYSFRLGNLQKYVEGEQVAAGWPGWLTAVAGEAIQGWVPLKADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSCSIYLVFEYMEHDITGLLSSPDIKFSEPQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNDGILKVADFGLANFSNPGHKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPEEYWKKSKLPHATLFRPQQPYNSCLRETFKDLPPTSVNLLQTLLSIEPYKRGTASSALSSEYFKTKPHACEPSSLPVYPPSKEIDVKQREESRRKKVGGRARGPETRKPSRKPSGFNKLVPAEDLASQTQKFQRVNSRSFNILKEGSINAGKEEPKPSSGKPNDASHTKNASQEDIPFSGPLQVSTSSGFAWAKRRKDDISIRSHCRSISRGHIVNPLESSVPNSMNSFDSRNMENKDCLGRSNSRSHDPLEIPKLSMQNQWSKFDRPNSFDASDEYHSQELSMALYHRDDSISKRSNLDQAEKVEFSGPLLSQMHTVDELLEKHERHIRQTVRRSWFQRGGTAK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0098 681 Pfam Protein kinase domain 115 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0098 681 Gene3D Transferase(Phosphotransferase) domain 1 198 438 - -
Mibi09g0098 681 ProSiteProfiles Protein kinase domain profile. 115 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0098 681 Gene3D Phosphorylase Kinase; domain 1 102 197 - -
Mibi09g0098 681 PANTHER CELL DIVISION PROTEIN KINASE 113 403 - -
Mibi09g0098 681 SMART serkin_6 115 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0098 681 FunFam probable serine/threonine-protein kinase At1g54610 198 438 - -
Mibi09g0098 681 FunFam probable serine/threonine-protein kinase At1g54610 102 197 - -
Mibi09g0098 681 MobiDBLite consensus disorder prediction 419 448 - -
Mibi09g0098 681 CDD STKc_CDK9_like 115 399 - -
Mibi09g0098 681 SUPERFAMILY Protein kinase-like (PK-like) 110 404 IPR011009 -
Mibi09g0098 681 MobiDBLite consensus disorder prediction 23 66 - -
Mibi09g0098 681 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Mibi09g0098 681 MobiDBLite consensus disorder prediction 403 520 - -
Mibi09g0098 681 MobiDBLite consensus disorder prediction 497 520 - -
Mibi09g0098 681 MobiDBLite consensus disorder prediction 459 480 - -
Mibi09g0098 681 MobiDBLite consensus disorder prediction 35 52 - -
Mibi09g0098 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0098 Mibi-ChrMibi09 1489537 1494448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0098 107 431 Core Cell Cycle Gene Families AT5G10270 51.026 2.62e-114 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi09g0098 Pkinase 8e-69 CL0016