Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0092 ATGTCAGAGCAAGAAACACAGTCATGCGGCTTCATCTTCGTCTGTTTCTTAATCCTCTTTTCAGGTAAAATTGTTGCCCAAGATTTTCTGGACACAGAGAGACAAATTCTGCTAGAGCTGAGAACTTATCTGGACAATCAAACTCGAACAGATCGAGGAAGATACAAGCTCTGGAACACAAACAGCTTAAATCATTGTGAATGGTCAGGAATATCATGCAGCCGTACAGGGACAACAACCTCGGCAGCGAGAGTGGTTGGAATAGACCTTTCTGACAGCAGCATCGCTGGCGAGATTTTCCAGAATTTCTCGCAGCTGACAAAGCTCACTCACCTTGATCTTTCCACAAACTCCATGACAGGAGAAATCCCAGAGGATTTAAGGCGATGCAGTAACCTCGTATATCTCAATCTCTCCCATAATCTTCTTGAGGGTGAGATGGATTTAACTGGATTGACAAGGTTAGAGACTCTGGACTTGTCCCAAAACAGGCTTCATGGGGACATAGGGTTGAATTTTCCTGCCATTTGTGACAAGTTAGTTACTCTGAATGTCTCTGGGAATAACCTCACTGGTTCCATTGATCATTGTTTCGATCAGTGCTTAGAATTGCAGTACTTGGATTTAAGCACCAATGATCTCAGCGGGGGTATTTGGATGGGATTTGCTAGGCTGAAGGAGTTTTCAGTCTCAGAGAACTATATCACAGGGCCTCTCAATGAACAAGCATTCCCAGAAAATTGTAACCTTAATGTACTCGACGTTTCATTCAACAAATTTACAGGAAATGCTCCGAAGAGTGTCAGTAAATGTAAGAATCTAGCGGTTTTGAGTCTTTCAAGTAACAAATTCTCAGGGGATATCCCCGTTGAATTGGGATCCATCTCAGGCCTCCGAGCATTGTACTTAGCCAACAATACATTTTCAAGGAGAATTCCAGAGACACTTTCAAACTTGAACAATCTAAATTTCTTGGATTTGAGCGGAAATGGCTTTGGTGGGGAGATACAAGGCACACTTGGGGTGCTAAAGCAGGTAAAGTTCCTCCTTTTGCATTCAAATGCTTACACTGGAGGATTAAACTCATCAGGCATTCTCAAATTACTCAACCTCTCTTGCTTAGACCTTAGTAACAACAGTTTTTCAGGTCCATTACCTATTGAAATCTCTCAGATGACTTCTCTGAAATTATTAATATTGGCCCATAATCAATTCACCGGAACTATTCCTCCTGAGTTTGGAAATTTGGCTCGACTTCAAGCACTTGATATATCTTTCAACAATTTAACGGGGCCAATCCCACCAAGCCTGGGAAACTTGGGTTCTATGTTATGGTTAATGCTTGCGAACAATTCTTTGACTGGAGAAATCCCAAAAGAGCTGGGAAATTGCACAAGCTTGCTGTGGCTGAACCTTGAGAACAATTATCTCACTGGGAATTTCCCTCCTGAATTGACCAACATCGGAAGAAACGCCATGGCCACGTTTGAATTGAATAGGAATGAAGCCAATGGAAATATCCCTGCTGGTTCTGTTGAATGTTCGGCAATGAAGAGATGGATTCCTGCAGATTACTCTCCTTTCAGCTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCATTTGGGATAGGTTACTAAAAGGGTATGGAATTTTCCCCATTTGCTCATCTGGGTCATTTTTCCGATTAAAGGAGATTTCTGGGTATGTTCAGTTAAGTGGGAATAATCTCATGGGAGAAGTCCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTTCACTTGGGGATAAACAAATTCTCAGGGAAAATCCCCGCAGTGATGGGAAACCTACCACTTGTGGTGTTGAACATAACAAGAAACAGTTTCTCAGGTGAGATTCCATGGGACATCGGAAACCTTAAATGTCTTAGGAATCTTGATCTGTCCAACAACAATTTCTCTGGGACATTCCCAACAAGCTTGAACAACTTGACAGAACTAAGTAAATTCAACATCTCTTACAATCCCTTCATTTTTGGGACAATCCCACCAACAGGACAATTAGCCACATTCGATGAAGATTCTTACCTGGGAGACCCACTCTTGTCCCTGCCAAGCTTCATCAATGACACCACAAACAACCAGAAAAAAAACACCACCTCTTATACGAGAGACCACGAAATCAGAAACAGAAACCCCACTAAACTCTCAATAATGTTAGCATTTCTGGCTATGGCACTTTCTCTGTTGGTATTCGGGCTCCTATCTTTCATACTGTGTTCATTAGCCAAAACCAAATCACCCTACCCAGAAGGATACCTATTGGAAGACACAAAAAGCCAACACAGCTCCGACAATTCAGCAGCATCATCATCATCACCATGGTCCTCCGACCTAATTAAGGTTATCCACTTGAACAAGATAGCATTCACACACGCCGACATCCTCAAAGCCACAGGAAACTTCTCCGACCACAGAATCATAGGAAAAGGCGGCTTCGGCACAGTGTACAGAGGAATATTCCCCGACGGAATCGAAGTCGCAGTGAAAAAGCTTCAGAGAGAAGGACTTGAAGGAGAAAGAGAGTTCAGAGCAGAAATGGAAGTCCTAACCGGAAACGGGTTCGGGTGGCCCCACCCGAATCTAGTCACCCTATACGGGTGGTGCCTAAACGGGTCAGAGAAAATCCTAGTTTACGAATACATGGAAGGAGGAAGCTTGGAAGATGCTGTTACAGACAGAACAAGACTCACCTGGAAGAGAAGGCTGGAAATCGCCATTGATGTGGCTCGAGCTTTGGTGTATTTACACCATGAATGTTTCCCACCCATTGTTCACAGAGACGTTAAAGCAAGCAATGTGCTTTTGGATGGCCATGGGAAGGCGAAAGTTACAGACTTTGGTCTAGCAAGAGTGGTGGAAAATGGGGTAAGTCACGTGACCACCATGGTCGCAGGAACAGTGGGTTACGTGGCACCTGAATATGGTCAGACATGGAAGGCGACGACCAAAGGTGATGTGTATAGTTTTGGAGTTTTGGCTATGGAGTTAGCTACTGGGAGGAGGGCTGTGGACGGTGGTGAGGAGTGTTTGTTGGAGTGGGCCCGGCGGGTCACGGGTTATGGGTATGGTCTGATCCGGCCCATGATACCGGTCTTGTTGATGGGCTCTGGGCTTGGAGAGGGCGCAGAGGAGATGGGTGAGTTGTTGAGGGTTGGGATTAAATGTACGGCGGAGGCACCACAAGCTAGGCCCAATATGAAGGAGGTTTTGTCAATGCTGGTCAACATGTTGAACCCAAAAGGGGAGTGA 3303 0.4441 MSEQETQSCGFIFVCFLILFSGKIVAQDFLDTERQILLELRTYLDNQTRTDRGRYKLWNTNSLNHCEWSGISCSRTGTTTSAARVVGIDLSDSSIAGEIFQNFSQLTKLTHLDLSTNSMTGEIPEDLRRCSNLVYLNLSHNLLEGEMDLTGLTRLETLDLSQNRLHGDIGLNFPAICDKLVTLNVSGNNLTGSIDHCFDQCLELQYLDLSTNDLSGGIWMGFARLKEFSVSENYITGPLNEQAFPENCNLNVLDVSFNKFTGNAPKSVSKCKNLAVLSLSSNKFSGDIPVELGSISGLRALYLANNTFSRRIPETLSNLNNLNFLDLSGNGFGGEIQGTLGVLKQVKFLLLHSNAYTGGLNSSGILKLLNLSCLDLSNNSFSGPLPIEISQMTSLKLLILAHNQFTGTIPPEFGNLARLQALDISFNNLTGPIPPSLGNLGSMLWLMLANNSLTGEIPKELGNCTSLLWLNLENNYLTGNFPPELTNIGRNAMATFELNRNEANGNIPAGSVECSAMKRWIPADYSPFSFVYSILTRKNCISIWDRLLKGYGIFPICSSGSFFRLKEISGYVQLSGNNLMGEVPSEIGNMQNFSMLHLGINKFSGKIPAVMGNLPLVVLNITRNSFSGEIPWDIGNLKCLRNLDLSNNNFSGTFPTSLNNLTELSKFNISYNPFIFGTIPPTGQLATFDEDSYLGDPLLSLPSFINDTTNNQKKNTTSYTRDHEIRNRNPTKLSIMLAFLAMALSLLVFGLLSFILCSLAKTKSPYPEGYLLEDTKSQHSSDNSAASSSSPWSSDLIKVIHLNKIAFTHADILKATGNFSDHRIIGKGGFGTVYRGIFPDGIEVAVKKLQREGLEGEREFRAEMEVLTGNGFGWPHPNLVTLYGWCLNGSEKILVYEYMEGGSLEDAVTDRTRLTWKRRLEIAIDVARALVYLHHECFPPIVHRDVKASNVLLDGHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVLAMELATGRRAVDGGEECLLEWARRVTGYGYGLIRPMIPVLLMGSGLGEGAEEMGELLRVGIKCTAEAPQARPNMKEVLSMLVNMLNPKGE 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0092 1100 PRINTS Leucine-rich repeat signature 109 122 - -
Mibi09g0092 1100 PRINTS Leucine-rich repeat signature 152 165 - -
Mibi09g0092 1100 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Mibi09g0092 1100 ProSiteProfiles Leucine-rich repeat profile. 132 153 IPR001611 GO:0005515
Mibi09g0092 1100 SMART serkin_6 819 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0092 1100 SUPERFAMILY L domain-like 571 682 - -
Mibi09g0092 1100 FunFam Calmodulin-binding receptor kinase CaMRLK 223 338 - -
Mibi09g0092 1100 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Mibi09g0092 1100 Pfam Leucine rich repeat 249 306 IPR001611 GO:0005515
Mibi09g0092 1100 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Mibi09g0092 1100 Pfam Leucine rich repeat 101 143 IPR001611 GO:0005515
Mibi09g0092 1100 Gene3D Transferase(Phosphotransferase) domain 1 899 1099 - -
Mibi09g0092 1100 Gene3D Ribonuclease Inhibitor 616 699 IPR032675 -
Mibi09g0092 1100 SUPERFAMILY L domain-like 222 483 - -
Mibi09g0092 1100 Pfam Protein kinase domain 820 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0092 1100 FunFam Leucine-rich repeat receptor-like protein kinase 899 1100 - -
Mibi09g0092 1100 ProSitePatterns Protein kinases ATP-binding region signature. 825 848 IPR017441 GO:0005524
Mibi09g0092 1100 SUPERFAMILY Protein kinase-like (PK-like) 793 1091 IPR011009 -
Mibi09g0092 1100 SMART LRR_sd22_2 152 173 - -
Mibi09g0092 1100 SMART LRR_sd22_2 106 129 - -
Mibi09g0092 1100 SMART LRR_sd22_2 637 663 - -
Mibi09g0092 1100 Gene3D Ribonuclease Inhibitor 340 615 IPR032675 -
Mibi09g0092 1100 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Mibi09g0092 1100 FunFam Nuclear pore complex protein NUP107 30 196 - -
Mibi09g0092 1100 SMART LRR_typ_2 416 440 IPR003591 -
Mibi09g0092 1100 SMART LRR_typ_2 106 130 IPR003591 -
Mibi09g0092 1100 SMART LRR_typ_2 392 415 IPR003591 -
Mibi09g0092 1100 SMART LRR_typ_2 152 172 IPR003591 -
Mibi09g0092 1100 SMART LRR_typ_2 295 319 IPR003591 -
Mibi09g0092 1100 SMART LRR_typ_2 637 661 IPR003591 -
Mibi09g0092 1100 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 505 - -
Mibi09g0092 1100 CDD STKc_IRAK 825 1091 - -
Mibi09g0092 1100 FunFam Leucine-rich repeat receptor protein kinase MSP1 781 898 - -
Mibi09g0092 1100 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 291 1092 - -
Mibi09g0092 1100 SUPERFAMILY RNI-like 61 290 - -
Mibi09g0092 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Mibi09g0092 1100 Gene3D Ribonuclease Inhibitor 245 339 IPR032675 -
Mibi09g0092 1100 Gene3D Phosphorylase Kinase; domain 1 780 898 - -
Mibi09g0092 1100 Gene3D Ribonuclease Inhibitor 176 244 IPR032675 -
Mibi09g0092 1100 ProSiteProfiles Protein kinase domain profile. 819 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0092 Mibi-ChrMibi09 1427646 1431210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0092 51 1091 Receptor kinase-like Gene Family AT4G39400 32.878 2.27e-147 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mibi09g0092 Pkinase 2.5e-44 CL0016