Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0091 ATGTGCTATGATATTCCTCCGAAATTCCCTATAGACACTTGTCACACCGTCGAGGAACCTTTCTCTCATTCTTCAGCCAGTTTTGCTTTAGATATGGGTGGTGGTGAGAAGGAGCAAAGCACAATACCCTTGGAGATTGCAATTCAGAAGGAACTAATTTATCGGAAGAAGGTTACTTCATCATCAATTCAAGCTCTCCAGCAGCCGCCATTATCATCAAACCAATTAAGTTCAAGCCCGTGCCTTTCAGGAGCCAAGAGAAAAGAATTGAGCAATCCACGTTATCCAACACTGGAGTTTGAAATCCAAGACAAGTTATACTGCAAAATCTGCAAATTGTCATGCTCAAGTCCCTCCAATCTAACACAACATTTGATGGGTCGAAAGCACAAGTCAAAGCTAAAAGAGCAAGATTTTGCACATAATCAGAAGAACGGACTAATGGAAGGGAGAGCCAATAAAATGAAATGGTGTGAACTGTGTAAAGTTCCATGTATGAATGAAGACTTGCTCAACTTGCACTTCAAGGGTAAAAAGCATAGGGTTGAACTACAGAAGTTTGAAATGAACATGGAAAGAGGTGGAGAGACCTCTAGTCAGAGAAAATGGTGTGAGCTATGCAAAATATGGTGCATTGATATGAATGCTTTTAAGCAGCATCTTGAAGGCAAAAAGCACCTGCTCCAAATGCACATTATGGAGAAAAATAAGAGAAGTTTGTGGCCTAATTTCATTGGGTGCCCAGCCGATGAGACGGTGAATGAGATGGAAAACGAGACCAGAAATATGAATGAAGCACTAAATGTCTTGAGGAGGAGGAGGAGTAACAGAGTACGGGAGAAGCCATTAAAGTTGAAAGGTTAA 864 0.4109 MCYDIPPKFPIDTCHTVEEPFSHSSASFALDMGGGEKEQSTIPLEIAIQKELIYRKKVTSSSIQALQQPPLSSNQLSSSPCLSGAKRKELSNPRYPTLEFEIQDKLYCKICKLSCSSPSNLTQHLMGRKHKSKLKEQDFAHNQKNGLMEGRANKMKWCELCKVPCMNEDLLNLHFKGKKHRVELQKFEMNMERGGETSSQRKWCELCKIWCIDMNAFKQHLEGKKHLLQMHIMEKNKRSLWPNFIGCPADETVNEMENETRNMNEALNVLRRRRSNRVREKPLKLKG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0091 287 SMART ZnF_U1_5 103 137 IPR003604 GO:0003676|GO:0008270
Mibi09g0091 287 SMART ZnF_U1_5 199 233 IPR003604 GO:0003676|GO:0008270
Mibi09g0091 287 SMART ZnF_U1_5 153 187 IPR003604 GO:0003676|GO:0008270
Mibi09g0091 287 MobiDBLite consensus disorder prediction 64 85 - -
Mibi09g0091 287 PANTHER ZINC FINGER RNA-BINDING PROTEIN 89 186 - -
Mibi09g0091 287 SUPERFAMILY beta-beta-alpha zinc fingers 148 186 IPR036236 -
Mibi09g0091 287 SUPERFAMILY beta-beta-alpha zinc fingers 103 137 IPR036236 -
Mibi09g0091 287 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Mibi09g0091 287 SMART c2h2final6 156 180 IPR013087 -
Mibi09g0091 287 SMART c2h2final6 202 226 IPR013087 -
Mibi09g0091 287 SMART c2h2final6 106 130 IPR013087 -
Mibi09g0091 287 MobiDBLite consensus disorder prediction 64 88 - -
Mibi09g0091 287 Coils Coil 249 273 - -
Mibi09g0091 287 Pfam Zinc-finger of C2H2 type 203 226 - -
Mibi09g0091 287 Pfam Zinc-finger of C2H2 type 106 130 - -
Mibi09g0091 287 Pfam Zinc-finger of C2H2 type 157 180 - -
Mibi09g0091 287 Gene3D Classic Zinc Finger 139 185 - -
Mibi09g0091 287 Gene3D Classic Zinc Finger 92 138 - -
Mibi09g0091 287 Gene3D Classic Zinc Finger 186 231 - -
Mibi09g0091 287 SUPERFAMILY beta-beta-alpha zinc fingers 196 230 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0091 99 193 C2H2 Transcription Factor Family AT2G19380 26.891 5.83e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi09g0091 zf-met 1.3e-06 CL0361