Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0082 ATGAGGTGCCGCAAGAAATCAAAGGGGTTGCTTGACATTTTCACCCCTGATCGGCTTCAAAGAACCAGGTTCAAGAAGCTGGATTTTAAGTCTGTCATGGAGGATTCTGTGGAAGGTGATGGTAAAGACGAAGGGAAGAGGGATTTCAAGTTCTTGGGTTCTGATTTGACCTCTCAAAGAGGAGGCAAGTTCGAGTGTACTACTTGCAACAAGATCTTCCATTCTTATCAGGCTCTTGGTGGCCATAGGGCCAGCCACAAGAAGATCCCCAGGGAACGCTTTGTTCCAGTGATAGATGAGAGCAGTGAAAATTCCATAAAGCCTGATTTGTCTCTCCATGAGACAATTTCTGGTTCTGATCTTCCATCCGGGCAGGCATTATTGGATGGGAACAATATATCATCCCTCTTAGCTGATGAGGCATCTGATGAGAGCAGAAAAGCTGAAAGAAGCAGCGATTTGATTGAGGAACCAGTTGACAAAATTAGGGAGCTGATTGATCTGAATCTTCCAGCTGATGATGGGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGCAACAATAATAGCAATTCTGAGTGTTACAGATCATCACCCTGGTGGGTGAGAAGCATCCCCAACAAGCAGGAGGTTCTAGTAGGCCATATTCTCTGA 663 0.454 MRCRKKSKGLLDIFTPDRLQRTRFKKLDFKSVMEDSVEGDGKDEGKRDFKFLGSDLTSQRGGKFECTTCNKIFHSYQALGGHRASHKKIPRERFVPVIDESSENSIKPDLSLHETISGSDLPSGQALLDGNNISSLLADEASDESRKAERSSDLIEEPVDKIRELIDLNLPADDGEEEEEEEEEEEEESNNNSNSECYRSSPWWVRSIPNKQEVLVGHIL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0082 220 Pfam C2H2-type zinc finger 64 88 - -
Mibi09g0082 220 Coils Coil 172 196 - -
Mibi09g0082 220 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mibi09g0082 220 MobiDBLite consensus disorder prediction 171 191 - -
Mibi09g0082 220 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 34 188 IPR044303 GO:0006355
Mibi09g0082 220 SUPERFAMILY beta-beta-alpha zinc fingers 63 87 IPR036236 -
Mibi09g0082 220 MobiDBLite consensus disorder prediction 165 199 - -
Mibi09g0082 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0082 Mibi-ChrMibi09 1382636 1383298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0082 62 178 C2H2 Transcription Factor Family AT3G60580 35.000 5.87e-13 64.7