Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0058 ATGGTGGCCACAGTGGAGACTGAAGCTGAAGAAGAGTCGGTACTGTGTGTGTGTGTTGCTGCCTCCCTCACCATTTCTCCCTTCTCCTTTCTCCCTTCTCTCGCAGCAATGGCCGCAGCTGCTCGCCCCCTCGTGACCATCCAAACCCTAGAAGCCGACATGGCCACCGATTCCCCCCAATCCCTCCCCCTCCCTGACGTCATGAAAGCCCCGATCCGACCAGACATTAACACCTTCGTTCACTCCAACATCTCCAGGAACAGCCGCCAACCCTACGCCGTCAGCCGCCGCGCCGGTCACCAGACCTCCGCCGAGTCATGGGGCACCGGTCGTGCTGTTTCTCGTATCCCACGTGTCCCCGGCGGCGGTACCCACCGTGCCGGTCAGGCCGCTTTCGGGAACATGTGCCGTGGTGGCCGCATGTTCGCTCCCACCAAGATTTGGCGCCGCTGGCACCGTAGGGTTAATGTGACTCAGAAGCGCCACGCCGTCGTTTCAGCCATCGCTGCGTCTGCTGTTACTTCTCTGGTTATGGCTCGCGGTCACAGGATCGAGACTGTGCCTGAGATGCCTCTTGTGGTTGGTGATTCTGCTGAAAGTGTTGAGAAGACTAAGGATGCGATCAAGGTTTTGAAGCAGATCGGCGCTTTTCCTGATGTTCAGAAGGCGAAGGACAGTCACGCGATTAGGCCTGGTAAAGGTAAGATGAGAAATCGGAGGTATATCTCACGCAAGGGTCCTCTGATTGTGTATGGAACTGAAGGAGCTAAGGCTGTTAAGGCGTTTAGGAACATTCCTGGTGTTGAGGTTGCCAATGTGGAGAGGCTTAATCTGCTGAAGTTGGCTCCTGGTGGTCATCTTGGGAGGTTCGTTATTTGGACCAAATCCGCGTTTGAGAAGCTGGATTCTATTTATGGATCGTTTGATAAGGCATCAGAGAAGAAGAAGAACTACCTGCTGCCTAGGGCCAAGATGGTGAATTCTGATTTGGCTAGGATTATTAACTCTGATGAGATTCAGTCGGTTGTGAGGCCGATCAGGAAGGAAGTGAAGAGGGCACCATTGAAGAAGAACCCGCTCAAGAATCTGAATGCCATGTTGAAGCTGAATCCACATGCCAAGACCGCCAAGAGGATGGCTCTGCTGGCTGAAGCTCAGCGTGTGAAAGCTAAGCAAGAGAAGCTTGACAAGAAGAGGAAGTCCCTCCCCAAGGAGGAGGCTTCAGCGATCAATGCTGCAGGGAAGGCATGGTACCACACCATGATCTCTGACAGCGATTACACAGAATTCGAGAACTTCTCTAAATGGTTGGGTGTTTCGCAGTGA 1326 0.5362 MVATVETEAEEESVLCVCVAASLTISPFSFLPSLAAMAAAARPLVTIQTLEADMATDSPQSLPLPDVMKAPIRPDINTFVHSNISRNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVTQKRHAVVSAIAASAVTSLVMARGHRIETVPEMPLVVGDSAESVEKTKDAIKVLKQIGAFPDVQKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKASEKKKNYLLPRAKMVNSDLARIINSDEIQSVVRPIRKEVKRAPLKKNPLKNLNAMLKLNPHAKTAKRMALLAEAQRVKAKQEKLDKKRKSLPKEEASAINAAGKAWYHTMISDSDYTEFENFSKWLGVSQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0058 441 FunFam 60S ribosomal protein L4 39 344 - -
Mibi09g0058 441 Pfam 60S ribosomal protein L4 C-terminal domain 316 388 IPR025755 -
Mibi09g0058 441 SUPERFAMILY Ribosomal protein L4 58 303 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mibi09g0058 441 PANTHER 60S RIBOSOMAL PROTEIN L4 40 434 IPR045240 -
Mibi09g0058 441 MobiDBLite consensus disorder prediction 90 109 - -
Mibi09g0058 441 Pfam Ribosomal protein L4/L1 family 63 302 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mibi09g0058 441 ProSitePatterns Ribosomal protein L1e signature. 156 182 IPR013000 -
Mibi09g0058 441 Gene3D - 39 344 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mibi09g0058 441 MobiDBLite consensus disorder prediction 90 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0058 Mibi-ChrMibi09 972851 976599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0058 38 441 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.426 0.0 672