Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0041 ATGGCTAATGATAATGATACCCTGCAGACAATCCTCTTAATCATAGTGGAACATATCGTGGCGCTAACCATAATCGGCGTCTTGCTTTGGCGAATTTATCGGTTCGCAACCCGCGATAGCCGCCGCCTCCGCCGCTATGGCATCCCGCCGCCGGAGTGTGCGATATGCTTGACGGAGTTGAAAGAAGGGGAAATAGGGCGAGTTCTGCCCAGCTGCGACCACTTGTTCCATCTCAACTGCAACGATGAGTGGCTACGCAACATAAAGACTTGCCCATTGTGCCGCAAGGTCGTCAAAATCAACCTTCCTCTTCCTCTTCCTCCCCCAGTTTGGTGCTCCACTAACTAA 348 0.5201 MANDNDTLQTILLIIVEHIVALTIIGVLLWRIYRFATRDSRRLRRYGIPPPECAICLTELKEGEIGRVLPSCDHLFHLNCNDEWLRNIKTCPLCRKVVKINLPLPLPPPVWCSTN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0041 115 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 52 101 - -
Mibi09g0041 115 SUPERFAMILY RING/U-box 52 103 - -
Mibi09g0041 115 SMART ring_2 53 94 IPR001841 -
Mibi09g0041 115 ProSiteProfiles Zinc finger RING-type profile. 53 95 IPR001841 -
Mibi09g0041 115 Pfam Ring finger domain 52 95 IPR001841 -
Mibi09g0041 115 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 101 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0041 Mibi-ChrMibi09 778609 778956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0041 50 99 Rapid Response to Elicitors AT3G16720 56.000 8.89e-17 72.0