Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0040 ATGGAGTCTTGGAAATACGGTTCTGGAGATACGGGTTTTGTGCCCAATAATACATTTCCACCTCTTAACACGCTTGCCAGAAGCAGAAATTCCTTCCTGGGTTGGGAATTCAAAACCCAACATAGTTTTTCCAACGACATTTTGGCCTCGGCTCAACAACATTTAGAGGGTCAGGCTCCTGAAATGTTGGGGAAACAGTTGTCTAATGATCCGCTTGGCTGCATCATGGGTGATCCAAATTCATTTTCTGGAGGTGAGGACTCTGCTTCAAAGCTTTCAAACTCTGTGGTTGAATCTAACAGCAGGGATTCACTCATTGATTTGAAGTTAGGACGAGTTGGTGATCAAAGAGATGCCTATGAATCGTCATTTTCTAAAGGCATTCCTCTTTTGAGTTCTTCAGAGTCATCTACGACCCCCAAGAGAGTGAAAGCTTCAGGGGTTCAGTCACAAACTGCTTTCTGCCAAGTCTATGGCTGCAACAAAAATCTAAGCGCCTCTAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTGCTAAAGTCATTGTGAATGGTATAGAACAAAGATTTTGTCAACAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGTTAAGCGCAGCTGTCGCAAACGCCTTGCAGGCCATAATGAGCGTCGCAGAAAGCCACAAATGGGTGCTCAGTCCGGAAAAGGAAGGAGGCTGCTTCAGTCATATAATGATAGCAGATTCCAGGGTAGCATGCTAACAGCAGCATCTTTTATCTGCCAAGAGATACTCCCAAGTGGTGTTTTGTACCCTGACAAGTATGGTGCTGATAACTGGTGGAAACCTATGAAGGTCCAAGGTGGGAATGATTTTAGGCATATCTCTGCAGTGCCCATCACAAATGGGCATTATCAATCCAGATCCCTCCTCCCTTCACATGCTGAAAAGCAATATGCGCTCCTGGATGAAACTGGCGCTATATTCTGTGAGAACAACAGTGAGTATCCACCTGCTTTTGGAGATGCTTATTCCGGTCCACGATCATCATTCCAAGACACCTTCTTAGGAAGTGAAGACTTTAATGTTTTTGATACAGCATCGACCATTCAGAGATTATCAGGACTATCAGACTCGGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACCCAGAACTCATCAAGCCATTCATCGGCAATCCCCATGGGTCGCCCCATGGTTACTCCTAGAAGCCACGGCCACTACAGCCCGAGTCATGCCTCTGAAAAGATCACGGGGATAAGCTCCCAGGCTTCAACGGGTGGGGTGTCAGCATCAGGTAGTTTTCCATCAGAAATTAATGATGGAGGTCGCTTTGGCCCTGTGTTAATATTAGACAATAATGAGATTGTCGACTTAGAAATCGCAGATGGCATTTTTCAAGGTCCAGATGTTGTGAATATGAAATCCTGTGAAGACGGTCCCACTATCGACTTGCTTCAACTGTCCTCGCAGCTTCACCGAGTTGAGCATCAACGACAATCCTTGCAGGTGAAGCAAGAAAATGATTCTTTTTGCTCCCTCAGGATTATTTAA 1578 0.4499 MESWKYGSGDTGFVPNNTFPPLNTLARSRNSFLGWEFKTQHSFSNDILASAQQHLEGQAPEMLGKQLSNDPLGCIMGDPNSFSGGEDSASKLSNSVVESNSRDSLIDLKLGRVGDQRDAYESSFSKGIPLLSSSESSTTPKRVKASGVQSQTAFCQVYGCNKNLSASKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDVKRSCRKRLAGHNERRRKPQMGAQSGKGRRLLQSYNDSRFQGSMLTAASFICQEILPSGVLYPDKYGADNWWKPMKVQGGNDFRHISAVPITNGHYQSRSLLPSHAEKQYALLDETGAIFCENNSEYPPAFGDAYSGPRSSFQDTFLGSEDFNVFDTASTIQRLSGLSDSGCALSLLSSQTQNSSSHSSAIPMGRPMVTPRSHGHYSPSHASEKITGISSQASTGGVSASGSFPSEINDGGRFGPVLILDNNEIVDLEIADGIFQGPDVVNMKSCEDGPTIDLLQLSSQLHRVEHQRQSLQVKQENDSFCSLRII 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0040 525 SUPERFAMILY SBT domain 153 232 IPR036893 GO:0003677|GO:0005634
Mibi09g0040 525 Coils Coil 493 513 - -
Mibi09g0040 525 MobiDBLite consensus disorder prediction 393 425 - -
Mibi09g0040 525 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 76 511 IPR044817 GO:0003677
Mibi09g0040 525 FunFam Squamosa promoter-binding-like protein 14 146 216 - -
Mibi09g0040 525 Pfam SBP domain 155 228 IPR004333 GO:0003677
Mibi09g0040 525 ProSiteProfiles Zinc finger SBP-type profile. 152 229 IPR004333 GO:0003677
Mibi09g0040 525 MobiDBLite consensus disorder prediction 220 239 - -
Mibi09g0040 525 Gene3D - 145 216 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0040 Mibi-ChrMibi09 771529 774988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0040 1 272 SBP-box Gene Family AT1G69170 40.357 1.64e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g0040 SBP 7.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0040 09 771529 774988 Mibi09g0040 09 771529 774988 ECH