Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0031 ATGCATTCCACCGGGGCCGGAGCTGCTGGCTTGGGAAACAGTAGGAGGCTGAGACCTGATCACACAAACCACAAGCATAAGCATAAGCATAAGGAGGAGGAGAGGTTGAAGTGCCAGAGGTGTGAATCGGTGAACACAAAGTTCTGCTACTATAACAACTACAACCTCTCCCAGCCCCGCCATTTCTGCAAGCGCCCTAACCTCAACTACTCTCATTATTCCAGCTGCAGTGTCAGCGCTCCTTCATCCAATAATCATCTTCACGATGACCCCAACCTCTTCCTCCATTCCACCTCCCAACCACCCAACAAGTAG 315 0.5111 MHSTGAGAAGLGNSRRLRPDHTNHKHKHKHKEEERLKCQRCESVNTKFCYYNNYNLSQPRHFCKRPNLNYSHYSSCSVSAPSSNNHLHDDPNLFLHSTSQPPNK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0031 104 Pfam Dof domain, zinc finger 34 65 IPR003851 GO:0003677|GO:0006355
Mibi09g0031 104 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Mibi09g0031 104 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 23 64 IPR045174 GO:0003700|GO:0006355
Mibi09g0031 104 MobiDBLite consensus disorder prediction 79 104 - -
Mibi09g0031 104 MobiDBLite consensus disorder prediction 1 36 - -
Mibi09g0031 104 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0031 Mibi-ChrMibi09 626326 626640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0031 22 64 C2C2-Dof Transcription Factor Family AT1G51700 67.442 9.20e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi09g0031 zf-Dof 1.1e-14 No_clan