Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0019 ATGGGGTGCTCCTTTTCTGGGTTGAATGCATTGTATGACAACGTAAACGGGGGCACCGATGTGTGGATCAACGATAACCGATTCCGCATCGTGAGGAAGCTCGGCGAAGGTGGCTTTTCCTTCGTCTACTTAGTCAAGGAGGTGCTCGCCGACCTCTCTCCTGCCTTAGCTGGCGGTGGTCTCTCTAAGAAGCTCAAAGACTCTTCCCATGTCTCCGACGATGGAACTTATGCTATGAAAAAGGTCATCATTCAAACCAATGAACAGCTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCACTCTTCAGTCATCCTAATTTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCAACCAAACAAACATCATCTTGGAATCATGAAGCATACATGCTGTTTCCCGTCCATTTGGACGAAACATTGGTTGGCGTTGCGCAAACTATGAAAACCAAGAAAGAATTCTTTTCTACGTCTGATGTGCTTCACATATTTCAGCAGCTTGCTGCAGGACTCAAGCACATGCACAATATGAATCCTCCGTATGCACATAATGATGTCAAGCCAGGGAATGTGGTAATAGCACGCAGAAAAGGACAGCCACCTCTTGTCATACTCATGGATTTTGGTAGTACTCAACCTGCCAGGTGGCAAATTCGCTCCCGATCTGAGGCACTGCAGTTGCAGGAATGGGCAGCTGAACATTGCTCTGCTCCTTTTCGAGCTCCTGAGCTATGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACCGATGTTTGGTCACTAGGATGCACGCTGTATGCAATAATGTATGGGGTATCTCCGTTTGAATATGCACTTGGAGAATCTGGGGGAAGCCTGCAATTGGCCATTATAAATGCTCAAATCAAATGGCCGGCTGGACCTAAGTTAGCATATCCTGATGCTCTTCATCAGTTTGTGACATGGATGCTTCAACCTCAGGCTACTGTGCGGCCCCGAATGGACGATATTGTTATCCATGTTGAAAAACTGATCGCCAAGTTCTCTCATTGA 1044 0.4674 MGCSFSGLNALYDNVNGGTDVWINDNRFRIVRKLGEGGFSFVYLVKEVLADLSPALAGGGLSKKLKDSSHVSDDGTYAMKKVIIQTNEQLELVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKQTSSWNHEAYMLFPVHLDETLVGVAQTMKTKKEFFSTSDVLHIFQQLAAGLKHMHNMNPPYAHNDVKPGNVVIARRKGQPPLVILMDFGSTQPARWQIRSRSEALQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQIKWPAGPKLAYPDALHQFVTWMLQPQATVRPRMDDIVIHVEKLIAKFSH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0019 347 Gene3D Phosphorylase Kinase; domain 1 12 137 - -
Mibi09g0019 347 Gene3D Transferase(Phosphotransferase) domain 1 142 345 - -
Mibi09g0019 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Mibi09g0019 347 Pfam Protein kinase domain 67 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0019 347 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 345 - -
Mibi09g0019 347 ProSiteProfiles Protein kinase domain profile. 28 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0019 347 SUPERFAMILY Protein kinase-like (PK-like) 19 337 IPR011009 -
Mibi09g0019 347 SMART serkin_6 28 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0019 347 CDD STKc_16 27 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0019 Mibi-ChrMibi09 398230 405282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0019 154 346 MAP Kinase Kinase Kinase AT2G43850 25.773 7.51e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Mibi09g0019 Pkinase 8.7e-28 CL0016