Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0008 ATGGCGGGTCGCAGAAGAAAGAGACACCGCTTTGGCAGAATCCATGCGTTTACCTGTGGGAAAGCTTCGGTTAGAGGGGAGCATTCGCTTATTGGAGGGCCTGGATTCTCCAGGATAGTGTTATGCAACGAACCAGAACAACGTGTGGAGGATTATGGCGATAATTACGTCAGAACCACTAAATATACACTAGCCTCGTTCCTCCCAAAGTCCTTATTCGAGCAATTTAGGAGGGTTGCTAACTTCTATTTCCTCGTGTGTGCCATCTTGTCCTTCTTCCCCGTTTCTCCATATTCAGCTGTCAGCAATGTTGTTCCTCTCGTGGTTGTGGTCGCCGTAAGTATGGGGAAAGAGATGGTTGAAGACTGGAAACGCAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATTGTGGAGGAGGCGCTTTTGATCATTTTAAGTGGAGGGATCTAAAGGTTGGAGACGTAGTAAAGGTGGAGAAAGATGAATTTTTTCCATCTGACCTTGTCTTACTTTCATCGAGTTATGATGATGCTGTTTGTTATGTTGAGACCATGAATCTTGACGGAGAAACGAATCTCAAGTTAAAACAGGGGCTGGAAGAAACTTCCAAACTGCAAGAAGATTCAAGCTTTCATGATTTCAAAGCTATGATCAAATGTGAAGACCCAAATGCAAATTTGTACTCCTTTGTGGGCACTCTACATCTTGAAGATCAACAGCACCCTCTTGCACCTCAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACCGATTTTATCTATGGTGTGGTAGTCTTTACAGGTCACGATACAAAGGTTATGCGGAATTCAACAGACCCTCCTTCAAAGAGAAGCAAAATTGAGAAACGAATGGATAAGATAATCTACTTCCTCTTCTTTGTCTTATTCATTATTTCTCTCATTGGATCCATTTTCTTTGGAATTTCAACTAGGCAAGACCTTGAAAATGGCAAAACCAAAAGATGGTACCTTAGACCAGATGATACTACAGTCTACTATAATCCAAATCAAGCAGCAGCTGCAGCAATTTTACATTTCTTGACCGCGCTTATGTTATATGGTTACTTGATTCCCATTTCCCTGTATGTTTCCATAGAAATCGTGAAAGTTCTTCAGAGCATATTCATTAACCAAGATGTGAGCATGTATTATGACGAAACTGACAAACCAGCTCATGCTCGTACGTCGAATTTAAATGAAGAACTTGGTCAAGTTTGTACCGTACTTTCAGATAAAACAGGAACTTTAACCTGTAATTCCATGGAGTTTATCAAGTGTTCCATTGCTGGGGTTGCTTATGGTCGTGGAGTAACAGAAGTTGAGAGAGCTCTAGCAAGAAGAAAAGGATCTCCTTTAGTTCAAAATCTTACAGATGAGGATGATCATATTGCAGGAAAGCCATCCATCAAAGGATTTAACTTTACAGATGAAAGGATTATGAATGGAAATTGGTTCAATGAGCCTCATGCAAGCGAAATCCAAAACTTTCTGCGTTTGCTGGCTGTATGCCATACTGCAGTACCTGAAGTTGACGAAGAAACAGGCAAAGTCTCATATGAAGCAGAATCACCAGATGAGGCAGCATTTGTGATTGCTGCAAGAGAACTAGGGTTTGAATTTTATGAAAGGACACAGACAACAATTTTGATTCGTGAGTTCAACCCTAAATCAAAGATGAAGGAGGAAAGATCCTACAAACTCTTAAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTCAGAGATGAGGAGGGGAAACTATTACTACTTTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTGGAAAGAATGGAAGGATGTTTGAGGAGAAGACTAAGAATCATATTGATGAGTATGCTGATGCTGGTCTGAGGACATTGTTACTTGCATATCGCACACTTGATGAGGAAGAATTTAATCAATTTAACAAAGAATTCACAGACGCCAAGAACTTGGTCAGTGCAGATCGGGAGCAGATTATAGAGGATGTAGCAGAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACTGCAGTTGAGGACAAACTTCAAAATGGGGTTCCTGAATGCATTGATAAGTTAGCACAAGCTGGAATTAAGCTATGGGTTTTGACCGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTAAGGCAAGGAATGACCCAAGTTATAATTAGCTCAGACACTCCAGAAATCAAATCACTAGAGAAAATGGAGGACAAGTCTGCTGCTGCAACGGCAATTAAGGCAAGTGTTCTTCATCAGCTAAAGGACGGAAAGGCATTACTTTCTAAGTCAGATGAAAACTCAGAGGCATTAGCTCTAATCATTGACGGGAAGTCTCTTACTTATGCACTCCATCATGATGTGAAGGACTTGTTTCTCGAACTTGCTGTTGGCTGTGCATCTATTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGACTGGTGAAGACTAAAACGGGTAGTACAACTCTTGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGCATCAGTGGCGTTGAAGGGATGCAGGCAGTTATGTCAAGTGACATTGCGATTGCCCAATTTCGGTTTCTTGAGCGCCTACTACTTGTGCATGGACATTGGTGTTACAGAAGGATATCAAAAATGATTTGCTACTTCTTTTACAAGAACATTGCCTTCGGTTTCACTCTCTTCTTCTTTGAAGTGTATGCATCATTCTCAGGTCAAGCTGCCTATAATGATTGGTTCATGCCACTGTACAACGTATTCTTCACTTCACTTCCTGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGCTAGATTATGTCTCAAGTTTCCACTGCTATATCAAGAAGGTGTCCAAAATGTCCTATTCAGCTGGAAACGAATTCTTGGTTGGATTTTTAATGGGCTGCTGACTTCTGCCATCATCTTCTTCTTTTGCATCAAAGCAATAGAGCATCAAGCCTTCAGAAAGGGCGGAGAAATTGCAGGTCTAGAAATCCTGGGAGCCACCATGTACACATGTGTCGTTTGGGTGGTCAATAGTCAAATGTCAATATCCGTAAGCTACTTCACATACATACATCATATATTCATATGGGGTGGCATTCTATTTTGGTACATATTTCTGTTGGCATATGGGGCCATGAATCCCTCCATTTCAACCACAGCCTTTATGGTGTTCATTGAAGCTCTTGCTCCCTCCCCATCTTACTGGTGCATCACTTTGCTTGTGCTTTTTTCCTGCCTTCTTCCATACTTCGCCTATTCTTCCATCCAGATAAGGTTTTTCCCAGTGTACCATCAAATGATACAGTGGATAAGAAATGACGGGCAAACCAGGGATCCTGAATACTGTGATATGGTGAGACAGAGATCCATACGTCACACGACCGTTGGGTACACTGCTCGTTTTGAAGCATCCAAACGATTTGAAGACAATCCTTATCACCATCATCAGCAGCATTAA 3576 0.4133 MAGRRRKRHRFGRIHAFTCGKASVRGEHSLIGGPGFSRIVLCNEPEQRVEDYGDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAVSMGKEMVEDWKRKQQDIEMNNRKVKVHCGGGAFDHFKWRDLKVGDVVKVEKDEFFPSDLVLLSSSYDDAVCYVETMNLDGETNLKLKQGLEETSKLQEDSSFHDFKAMIKCEDPNANLYSFVGTLHLEDQQHPLAPQQLLLRDSKLRNTDFIYGVVVFTGHDTKVMRNSTDPPSKRSKIEKRMDKIIYFLFFVLFIISLIGSIFFGISTRQDLENGKTKRWYLRPDDTTVYYNPNQAAAAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVSMYYDETDKPAHARTSNLNEELGQVCTVLSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALARRKGSPLVQNLTDEDDHIAGKPSIKGFNFTDERIMNGNWFNEPHASEIQNFLRLLAVCHTAVPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTQTTILIREFNPKSKMKEERSYKLLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGRMFEEKTKNHIDEYADAGLRTLLLAYRTLDEEEFNQFNKEFTDAKNLVSADREQIIEDVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQVIISSDTPEIKSLEKMEDKSAAATAIKASVLHQLKDGKALLSKSDENSEALALIIDGKSLTYALHHDVKDLFLELAVGCASIICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIAFGFTLFFFEVYASFSGQAAYNDWFMPLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWIFNGLLTSAIIFFFCIKAIEHQAFRKGGEIAGLEILGATMYTCVVWVVNSQMSISVSYFTYIHHIFIWGGILFWYIFLLAYGAMNPSISTTAFMVFIEALAPSPSYWCITLLVLFSCLLPYFAYSSIQIRFFPVYHQMIQWIRNDGQTRDPEYCDMVRQRSIRHTTVGYTARFEASKRFEDNPYHHHQQH 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0008 1191 Gene3D - 106 283 - -
Mibi09g0008 1191 Pfam Phospholipid-translocating ATPase N-terminal 42 102 IPR032631 -
Mibi09g0008 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Mibi09g0008 1191 Gene3D - 693 896 IPR023214 -
Mibi09g0008 1191 FunFam Phospholipid-transporting ATPase 534 692 - -
Mibi09g0008 1191 SUPERFAMILY Calcium ATPase, transduction domain A 143 281 IPR008250 -
Mibi09g0008 1191 Gene3D - 538 692 IPR023299 GO:0000166
Mibi09g0008 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 823 939 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi09g0008 1191 FunFam Phospholipid-transporting ATPase 692 896 - -
Mibi09g0008 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 43 1134 IPR023298 -
Mibi09g0008 1191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1147 - -
Mibi09g0008 1191 CDD P-type_ATPase_APLT_Dnf-like 54 1016 - -
Mibi09g0008 1191 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 52 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mibi09g0008 1191 SFLD p-type atpase 403 907 IPR044492 -
Mibi09g0008 1191 SUPERFAMILY HAD-like 419 911 IPR036412 -
Mibi09g0008 1191 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Mibi09g0008 1191 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Mibi09g0008 1191 FunFam Phospholipid-transporting ATPase 113 283 - -
Mibi09g0008 1191 SFLD Haloacid Dehalogenase 403 907 - -
Mibi09g0008 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 491 694 IPR023299 GO:0000166
Mibi09g0008 1191 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Mibi09g0008 1191 Pfam Cation transport ATPase (P-type) 514 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0008 Mibi-ChrMibi09 214940 220346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0008 13 1185 Primary Pumps ATPases AT3G25610 69.705 0.0 1754