Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0001 ATGTCGCCTTTTGATTCTGCGGCCTTCCTTTTTCCTCTCATGACGGGCATGAGGGAGAATATGAGCTGGCGGAGAGTTTTGAAGTCTGTGCAGGCCCTCGCTGCCCATACCCTTCTCTTTTGCTTCACTCTTCTTCTCGTCTTCAAGCTTGATCACGTTGTCTCCTGCTCTTGGTGGATAATATTTTTTCCACTATGGATGTTTCATGCTACTGTGGCTCGAGGAAGGTTTTCATTACCTGCACCATCAGTTCCACGTAATCGGCATTGGGCACCATGCCATGCCATTGTTGCAATACCATTGCTTATTGCGTTTGAATTGCTCCTTTGTATATATCTTGAGAGCTTATATGTTCATGGTTTTGCTGCTGTCAATCTTAAGATTGTGTTCCTTCCCTTACTAACATTTGAAATAATTATTCTGATTGACAATTTCAGAATGTGTAGGGCTCTGATGCCAGGGGATGAAGAAAACATGAGTGATGAGGCAATATGGGAAACACTTCCTCACTTTTGGGTTGCAATCTCAATGGTCTTCTTTGTTGCTGCTACAGTCTTCACACTCTTAAAACTGTGTGGTGATGTAGGTGCTCTTGGCTGGTGGGACTTGTTCATAAACTTTGGTATTGCCGAGTGCTTTTCCTTTCTTGTATGTACAAAGTGGTCAAATCCAATTATTCATAGAAATTCTCGCTCAAGAGAAGCCAGTTCATCTTCTAGTACAATTAGATATCTTGATCGGAATAGTGGCGTAGTAGTTTCGTCAGAGGACAATCAACATCAGGGGAGAATGTGTGGCCTACAAGATATAGGAGGTCACTTTATGAAGGTTCCAGTCATTGGATTCCAGATTCTTCTGTGCATGCGTTTAGAGGGAACACCTGCTAGTGCTAGACATATACCACTTTTATTTCTCTTCTCCCCTCTTTTTCTGCTACAAGGTGCTGGTGTACTGTTTGCTGCGTCTAAATTGGTGGAGAAAATTATACTTCTGCTACGTAGTGGAGCTGGTGGGGGAATATATTTTGGATTTTCTTCAAGGGCTCATGATTGCTTGGGGTTTTTGCACCATGGTTCAAGGTTATTGGGGTGGTGGTCCATTGATGAAGGGAGTCGAGAAGAACAGGCACGATTGTTCCAAGAGAGGGCATCCGGGTATAACACTTTCGGTGGTTATCCTCCTGATGTTGTTAAGAAAATGCCAAAAAAGGATCTTGCCGAGGAGGTTTGGAGACTCCAGGCAGCTCTTGGAGAACAAACAGAAATTACAAAATATAGTCAACAGGAGTTTGAAAGACTCCATAATGAGAAAGTGTTGTGCAGAATTTGTTTTGAGGGGGAGATTAGCGTTGTGTTGCTACCTTGCAGGCACCGAATCCTCTGCAGCGCTTGCTCTGAGAAGTGTAAGAGGTGCCCAGTTTGCCGGGTCTCAATTGAGGAGCTATTACCTGTATATGATGTTTAA 1464 0.4351 MSPFDSAAFLFPLMTGMRENMSWRRVLKSVQALAAHTLLFCFTLLLVFKLDHVVSCSWWIIFFPLWMFHATVARGRFSLPAPSVPRNRHWAPCHAIVAIPLLIAFELLLCIYLESLYVHGFAAVNLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGDVGALGWWDLFINFGIAECFSFLVCTKWSNPIIHRNSRSREASSSSSTIRYLDRNSGVVVSSEDNQHQGRMCGLQDIGGHFMKVPVIGFQILLCMRLEGTPASARHIPLLFLFSPLFLLQGAGVLFAASKLVEKIILLLRSGAGGGIYFGFSSRAHDCLGFLHHGSRLLGWWSIDEGSREEQARLFQERASGYNTFGGYPPDVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEFERLHNEKVLCRICFEGEISVVLLPCRHRILCSACSEKCKRCPVCRVSIEELLPVYDV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0001 487 ProSiteProfiles Zinc finger RING-type profile. 440 475 IPR001841 -
Mibi09g0001 487 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 415 485 IPR013083 -
Mibi09g0001 487 SUPERFAMILY RING/U-box 431 482 - -
Mibi09g0001 487 SMART ring_2 440 474 IPR001841 -
Mibi09g0001 487 Pfam Zinc finger, C3HC4 type (RING finger) 437 480 - -
Mibi09g0001 487 Pfam Transmembrane Fragile-X-F protein 49 312 IPR019396 -
Mibi09g0001 487 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 21 487 - -
Mibi09g0001 487 FunFam Kinesin-like protein KIN-7D, mitochondrial 417 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0001 Mibi-ChrMibi09 24354 39716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0001 21 487 C3H Transcription Factor Family AT1G73950 70.878 0.0 678
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0001 09 24354 39716 Mibi09g0001 09 24354 39716 ECH