Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2666 ATGGAGAAGAGTGTGAGCACCCTATCGGCAAAGGACGCCTTCGAGAAGCTAGAGAAGGTAGGAGAAGGGACGTATGGGAAGGTGTACAGAGCAATAGATAAATCAACTGGCAAGATCGTTGCTCTCAAGAAGACGCGCCTGCACGAGGATGAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATTCTGCGCATGCTCTCTAGGGATCCCCATGTTGTCAGACTGATGGATGTAAAACAGGGTCAGAACAAGGAAGGGAAGACAGTGCTGTACTTGGTGTTTGAGTACATGGACACGGATCTCAAGAAATTCATTCGCAGTTTCCGTCAAACTGGAGAAAACATCCCCGCTGCAACGGTCAAAAGCTTGATGTACCAACTTTGCAAAGGCGTTGCTTTCTGTCATGGTCATGGAATCTTGCATAGGGATCTGAAGCCTCATAACCTCTTGATGGACCGCAAAACGATGATGCTTAAAATAGCTGATCTTGGGCTGGCTCGAGCATTTACTGTGCCAATTAAGAAATACACGCATGAGATCCTGACCTTGTGGTATAGAGCTCCTGAAGTCCTTTTGGGAGCAACCCATTACTCAATGGCGGTAGACATGTGGTCTGTAGCTGAACTAGTCACCAAGCAAGCCCTCTTTCCTGGGGACTCTGAGCTGCAACAGCTTCTGCATATATTCCGACTGTTGGGTACTCCAAATGAAGAGATTTGGCCAGGCGTTAGTAAACTAATGAACTGGCATGAATACCCCCAGTGGAGTCCTCAAAATCTCTCTATCGCTGTTCCTAATTTGGAGGAGACTGGATTGGATCTGCTCTCTCAAATGCTGCAATACGAACCTTCAAAACGCATTTCCGCAAAGAAAGCTATGGAACACCCTTATTTCGATGAACTGGACAAGAAGTATCTTTAG 927 0.4736 MEKSVSTLSAKDAFEKLEKVGEGTYGKVYRAIDKSTGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGENIPAATVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVAELVTKQALFPGDSELQQLLHIFRLLGTPNEEIWPGVSKLMNWHEYPQWSPQNLSIAVPNLEETGLDLLSQMLQYEPSKRISAKKAMEHPYFDELDKKYL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2666 308 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Mibi08g2666 308 ProSiteProfiles Protein kinase domain profile. 14 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2666 308 Pfam Protein kinase domain 14 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2666 308 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Mibi08g2666 308 PANTHER CELL DIVISION PROTEIN KINASE 12 301 - -
Mibi08g2666 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mibi08g2666 308 Gene3D Transferase(Phosphotransferase) domain 1 102 307 - -
Mibi08g2666 308 FunFam Cyclin-dependent kinase 2 102 307 - -
Mibi08g2666 308 FunFam Cyclin-dependent kinase B2,2 10 100 - -
Mibi08g2666 308 SMART serkin_6 14 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2666 308 SUPERFAMILY Protein kinase-like (PK-like) 10 304 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2666 Mibi-ChrMibi08 44550630 44552418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2666 1 306 Core Cell Cycle Gene Families AT1G76540 83.226 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Mibi08g2666 Pkinase 2e-66 CL0016