Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2658 ATGCATGTCGATCGTGGGAGATTAAGGGAGCTAGATTGGATCTTCAACTGTACAAGACACTGGAAGACATCATGGTGTCTAAAAGCATGTGGGATCCACACGACGCGGAAGTTAAAACCAGAAACAGGCCCGCCAAAGAGTGGTGCTGCTTCAGGGGAGGTGGAGGTGGAGGTGGAGGGGCCAAGTAGGAACATCATGGGAGCTCAAAAACTGAAAATATTCAGTATAGAGGAGGTGAAGAGCGCCACCAGGAACTTCAGACCGGACACGGTGGTGGGGGAGGGTGGGTTTGGGAGAGTGTTCAAGGGATGGATCGACCAAAAGACGTTGAAGCCCTCCAAAGTTGGGGTTGGAATGGCCGTGGCCGTGAAGAGGTCTAATCCTGACAGTGTGCAGGGCTTAGAAGAATGGCAGAGCGAGGTGAGATTCCTGGGCAAGTTCTCTCATCCAAACCTGGTCCACCTCATTGGCTACTGCTTGGAGGAGAACCAACTCATGCTTGTATACGAGTACATGCAGAAGGGCAGCCTGGAAAACCACCTCTTTGGGAGAGGACCCGAGGCGCTTGCATGGGACACAAGGCTGAAGATCGCCATAGGAGCAGCTCGAGGCCTGGCCTTCCTGCACGCGTCGGAGAAGTCTGTCATCTATCGGGACTTCAAGTCCTCCAACATTTTGCTGGATGGGGAGTTCAACGCCAAGCTTTCGGATTTCGGGCTGGCCAAGCTTGGCCCCGTCAACGGCAGATCCCACATCACCACCCGAGTCATGGGCACTTACGGTTATGCCGCCCCCGAGTATATTGCCACCGGCCATCTCTACGTCAAAAGCGATGTGTACGGCTTTGGCGTGGTGCTCCTCGAAATTCTGACAGGCTTGGCGGCCCTTGATCCCAACAGACCCTGTGGTGAACAGAATTTGGTGGATTGGAAGAGATCCTATTTGAGCCGTAAGAAGAAGCTGAGAGCCATTATTGACCCCAAACTGGGCCACAGGTATTCCCCCCAGGCCGCCCTCACCATATGCCGCCTCATTCTCACCTGTCTACAGCCCGATCCTAAAGATCGACCCTCCATGCAGCATGTGGTCACTACCTTAGAGAAGGCCTATCGCACTCCCTATAATCCAAGATGA 1134 0.5388 MHVDRGRLRELDWIFNCTRHWKTSWCLKACGIHTTRKLKPETGPPKSGAASGEVEVEVEGPSRNIMGAQKLKIFSIEEVKSATRNFRPDTVVGEGGFGRVFKGWIDQKTLKPSKVGVGMAVAVKRSNPDSVQGLEEWQSEVRFLGKFSHPNLVHLIGYCLEENQLMLVYEYMQKGSLENHLFGRGPEALAWDTRLKIAIGAARGLAFLHASEKSVIYRDFKSSNILLDGEFNAKLSDFGLAKLGPVNGRSHITTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLAALDPNRPCGEQNLVDWKRSYLSRKKKLRAIIDPKLGHRYSPQAALTICRLILTCLQPDPKDRPSMQHVVTTLEKAYRTPYNPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2658 377 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 172 375 - -
Mibi08g2658 377 Gene3D Transferase(Phosphotransferase) domain 1 172 374 - -
Mibi08g2658 377 ProSiteProfiles Protein kinase domain profile. 86 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2658 377 SUPERFAMILY Protein kinase-like (PK-like) 65 367 IPR011009 -
Mibi08g2658 377 MobiDBLite consensus disorder prediction 36 56 - -
Mibi08g2658 377 Gene3D Phosphorylase Kinase; domain 1 56 171 - -
Mibi08g2658 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Mibi08g2658 377 ProSitePatterns Protein kinases ATP-binding region signature. 92 124 IPR017441 GO:0005524
Mibi08g2658 377 Pfam Protein tyrosine and serine/threonine kinase 90 366 IPR001245 GO:0004672|GO:0006468
Mibi08g2658 377 CDD STKc_IRAK 92 368 - -
Mibi08g2658 377 PANTHER OS01G0588500 PROTEIN-RELATED 58 368 - -
Mibi08g2658 377 FunFam Serine/threonine-protein kinase BIK1 54 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2658 Mibi-ChrMibi08 44454497 44456388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2658 72 366 Glycoside Hydrolase AT3G07070 49.664 1.11e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi08g2658 PK_Tyr_Ser-Thr 5.5e-46 CL0016