Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2651 ATGGGCTGCTGTGTATCTTCCTTCTCCATTTCCAAGGATTCTATCCCTCATTTGGAATTGGATAATCGCAGTAGCAATAACAACAACCTCAATCTTCCTTCTTCCTCCAACGGCGACTCCCCGCCGTTCTTGGAGTTCTCCCTCGCCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGCGGCGAGAGAGCCCCCAATGTCGTCTACAAGGGTCGTCTCCACAATCAGAACCGCCGTTCTATTGCCGTCAAGAAATTCACCAAGTTGGCCTGGCCCGACCCTAAACAGTTCGCTGATGAAGCTCTTGGTGTTGGCAAATTACGGCACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTACTCGTCGCAGAGTACATGCCCAACGATACCCTCGCTAAACATCTATTTCACTGGGAGAATCAGACAATAGAGTGGGCCATGCGGCTAAGAGTTGCCTTAAACATTGCAGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCATTGTATCATGATTTGAATGCCTACAGAGTTCTCTTTGATGAGAATGGTGATCCCCGGCTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATATGAGAAATGGGAGGGTGACCCCAGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTCCTAAGTGGAAAGCATATCCCTCCAAGTCATGCTCTTGATATGATAAGGGGCAAGAATATACTTATCCTTATGGATTCACATTTGGAGGGAAACTTTTTAACTGATGAAGCAACTGTGGTTTTGGATCTAGCCTCTCGATGTTTGCAGTCTGAACCTCGGGAGCGGCCCAAGACCAATGACCTTGTTATCACACTCTCCCCACTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTTCAAAGCAAGAGGAGGCACCCCCTACTCTGCAGCATCCTCTGTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGCACACTACAGAGACGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAACAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCTTTTCGTGACAAGGATTTTAAGACTGCGATGGAGTGTTACTCCCAGTTTATCGAGGTGGGAACAATGGTATCCCCAACAGTGTATGCTCGGAGGAGTCTTTGCCATCTGATGTGTGATCAACCAGATGCTGCTCTTAGAGATGCGATGCAAGCGCAATGTGTGTATCCTGAGTGGTCTACAGCATTTTACATGCAGGCCGTTGCTCTTTCCAAATTAAGCATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTTCTGCCCTTGAAGACAAAAGACGGGGCAAAGGCTCTTCCTCTTGA 1500 0.4653 MGCCVSSFSISKDSIPHLELDNRSSNNNNLNLPSSSNGDSPPFLEFSLADLKAATNNFSPDHIVSESGERAPNVVYKGRLHNQNRRSIAVKKFTKLAWPDPKQFADEALGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYMRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILILMDSHLEGNFLTDEATVVLDLASRCLQSEPRERPKTNDLVITLSPLQNKPDVPSNVMLGISKQEEAPPTLQHPLSPMGDACSRMDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLSMDKDAADMLNEASALEDKRRGKGSSS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2651 499 MobiDBLite consensus disorder prediction 20 38 - -
Mibi08g2651 499 Pfam Protein kinase domain 74 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2651 499 SUPERFAMILY Protein kinase-like (PK-like) 40 321 IPR011009 -
Mibi08g2651 499 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Mibi08g2651 499 MobiDBLite consensus disorder prediction 19 38 - -
Mibi08g2651 499 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 24 493 IPR045845 GO:0004672|GO:0009742
Mibi08g2651 499 ProSiteProfiles Protein kinase domain profile. 61 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2651 499 Gene3D Tetratricopeptide repeat domain 388 495 IPR011990 GO:0005515
Mibi08g2651 499 FunFam probable serine/threonine-protein kinase At5g41260 140 331 - -
Mibi08g2651 499 Gene3D Transferase(Phosphotransferase) domain 1 140 331 - -
Mibi08g2651 499 SUPERFAMILY TPR-like 393 489 IPR011990 GO:0005515
Mibi08g2651 499 FunFam probable serine/threonine-protein kinase At4g35230 34 138 - -
Mibi08g2651 499 FunFam probable serine/threonine-protein kinase At4g35230 388 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2651 Mibi-ChrMibi08 44316721 44321046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2651 46 322 Glycoside Hydrolase AT3G07070 35.197 6.22e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mibi08g2651 Pkinase 1.2e-26 CL0016