Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2650 ATGTGGGGGCCACTGGTTTCGCACCATTGGAGGAGGGGAGGAGGGAAGAGAGAGAGAGAGAGAGAGAGAGTGATGGAGGGAGTAGATGGAAGGAGTGGATACTGCAAAACAAACTCCATCTTCTACAGCAAAAGGGATCGGCTGCCTCTGCCTCAGAAGCAATCGCTGGACGTGACCACTTTCATCTCCTCCCGGGCCCACCACGGGAAGGTGGCGTTCATCGATGCCCCCAGCGGGCGCCACGTGAGCTTCCAGGAGCTGTGGAGGGCGGTGGAGGGGGTGGCGACCTCTCTCTGGGACATGGGCATCAGGAAGGGCCACGTGGTGCTCCTACTGTCCCCCAACTCCATATACTTCCCCGTGGTGTGCCTGGGCGCCATGTCCCTGGGCGCCATCATCACCACCACAAACCCCCTCAACACCACCCGCGAGATCGCCAAGCACATCTCCGACTCCAACCCCTCCCTCGCCTTCACTGTCCCCCCTCTCCTCCCCAAGATCACCGCCGCCTCCTCAGGCCTCCCCATCGTTCTCATGGAGGAGGAGGAGGAGGAGGACCCCATCACGATCACAGAGCCTAGAATCGCCACCACGCTGGGCAAGATGATGGCGACGGAGCCCCGCGCCAGGCGGATGAGGGAGCTCGTTGACCAAGACGACACGGCAACCTTGCTGTACTCTTCGGGCACCACGGGCCCAAGTAAGGGGGTGGTGTCGTCGCACCGCAATCTGATGGCCATGGTTCAGATAGTTTTGGGTCGATTCAAGATGGAGAGGGAGGAGACGTTCATCTGCACAGTGCCAATGTTCCACATATATGGCCTGGTTGCCTTCGCCACGGGCCTTCTGGCTGCAGGATCCACCATTGTGGTGCTCCCCAAGTTCGACATGGACCACATGCTTTCTGCCATCCACAAGTACCGGGCCACCTACCTCCCGCTGGTGCCGCCCATACTGGTGGCCATGATCAACGGTGCGGATGCCATGAGGGCCAAGTACGACCTCACCTCCCTCCATTCGGTTCTATCGGGTGGGGCCCCACTCAGCAGGGAGGTTATAGAGGGCTTTTTGGCCAAGTTCCCCAATGTCACCATCCTCCAGGGTTACGGCCTCACCGAATCCACCGGGGTCGGCGCATCCACCGACTCTCTTGAGGAGAGCCGCAGGTACGGCACCGCCGGCCTCCTGTCCCCGTCCACCCAGGCCAAAGTGGTTGACCCTCTCACCGGGCAGCCTTTGCCCCCTAATCGCACCGGTGAGCTCTGGCTCAGAGGTCCCACCATCATGAAAGGTTATTTCAGCAACGAGGAAGCAACCACCTCCACCCTTGATTCGGAGGGATGGTTGAGAACCGGAGATATTTGCTACATTGATGGCGATGGATATATATTCATTGTTGATAGGCTGAAAGAGCTTATTAAATACAAGGGATATCAGGTCCCGCCAGCAGAACTAGAGGCCTTGTTGCTCACTCATCCTGCAGTTTCAGATGCTGCTGTCATACCATTCCCGGATAAGGAGGTTGGGCAGTATCCGATGGCATACTTAGTGAGGAAAAATGGGAGTAATGTATCTGAAAGGGAAATTATGGATTTTGTGGCCGCACAGGTTGCACCATATAAAAGAATTCGAAGAGTGGCATTTATTTCTTCAATACCCAAGAACCCGTCCGGCAAAATCCTCAGGAAGGATCTCATCAAGCTCGCCACATCTAAGCTCTGA 1722 0.5703 MWGPLVSHHWRRGGGKRERERERVMEGVDGRSGYCKTNSIFYSKRDRLPLPQKQSLDVTTFISSRAHHGKVAFIDAPSGRHVSFQELWRAVEGVATSLWDMGIRKGHVVLLLSPNSIYFPVVCLGAMSLGAIITTTNPLNTTREIAKHISDSNPSLAFTVPPLLPKITAASSGLPIVLMEEEEEEDPITITEPRIATTLGKMMATEPRARRMRELVDQDDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFKMEREETFICTVPMFHIYGLVAFATGLLAAGSTIVVLPKFDMDHMLSAIHKYRATYLPLVPPILVAMINGADAMRAKYDLTSLHSVLSGGAPLSREVIEGFLAKFPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPSTQAKVVDPLTGQPLPPNRTGELWLRGPTIMKGYFSNEEATTSTLDSEGWLRTGDICYIDGDGYIFIVDRLKELIKYKGYQVPPAELEALLLTHPAVSDAAVIPFPDKEVGQYPMAYLVRKNGSNVSEREIMDFVAAQVAPYKRIRRVAFISSIPKNPSGKILRKDLIKLATSKL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2650 573 CDD 4CL 50 565 - -
Mibi08g2650 573 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Mibi08g2650 573 Gene3D - 471 572 IPR045851 -
Mibi08g2650 573 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Mibi08g2650 573 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Mibi08g2650 573 Pfam AMP-binding enzyme 65 475 IPR000873 -
Mibi08g2650 573 SUPERFAMILY Acetyl-CoA synthetase-like 65 570 - -
Mibi08g2650 573 MobiDBLite consensus disorder prediction 1 22 - -
Mibi08g2650 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 34 567 - -
Mibi08g2650 573 Gene3D - 38 470 IPR042099 -
Mibi08g2650 573 FunFam Long-chain-fatty-acid--CoA ligase FadD 42 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2650 Mibi-ChrMibi08 44308506 44311353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2650 28 573 Monolignol Biosynthesis Gene Families AT1G20500 62.000 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2650 08 44308506 44311353 Mibi08g2650 08 44308506 44311353 ECH