Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2646 ATGGCAGGCCAGAGCTCTAATGATAGTCCCAGTGCTAGTAATGTTTCAACCGAATTGTCCGATTCAAATGTTCAACTCAATGTCAAGACTTTAGATTCCCACATTTACAGTTTTCAAGTGGATAAAAACATGCTAGTTTCATTGTTGAAGGAGAAAATAGCCAATGAAACTGGTGTTCCAGTTGGCCAGCAGCGACTAATATTCCGGGGGAAAGTCTTGAAGGATAATCATGTTCTTTCTGAGTATCACGTTGAGAATGGGGATACATTGCATTTAGTTCAAAGGCAACTGAACCAGTCACAGGCTCCTGGTACCAGTTCTGGTGAGACAACTGGTACAAGTGGAGACCGAGGAAATGATGCAAGCTCTGGGTCCCTTCACAATCGTGTTGGGCAAATATCACACAGTGTTGTTCTGGGGACCTTTAATGTGGGGGACCAAGGTGAAGGAGTTGTTCCTGACCTTGGTCGGGTTATTGGGGCGGTTTTGAACTCTATTGGAATTGGTGGGCAGAGCAATGGTGGTGTTGCAACTGGTACACAGTCTTCTTCAGGTCCTTTGGGGAATGAGGCTGGAAGAACGCATCTTGAAAATCAGAACCAATCAGGAAATCAAGCACAGACTGGACAGACATTTCCTAATCAACCTTTCCCATCTTTACCTCAAGTAGTTCAGATTCCTCTGGCTGCAGGATCCACAACTTTGCCGTCACTTAGTGCACCAATTCCTCATTCGCTGGATACTCTCTCTGAGTTCATAAATCGCATGGAGCAGACGCTATCACAGAATGGTTATCAAACAAATTCATCTTCAGTGAGTGGAAGAGAGCAAACACATGTTGAATTACCCTCGAACCAACAAGGGTTGCCAACAGTTGAAGCATTAAGTGCTGTCTTGCATCGTGCTGAACGGCTGCTCAGTGGCCATGCAATTGCTGCACTATCTCATATTGCAGGACGCTTGGAGCGAGAGGGAACTACTTCTGATCCAAATATAAGGGGTCAAATACAGTCCGAGTCAATGCAAATAGGACTTGCCATGCAGCATTTGGGTGCATTTCTACTGGAGCTTGGCCGTACAATTTTGACACTGCGTATGGGACAGTCTTCTGTGGAGTCTGCTGTCAATGCTGGGCCAGCAGTTTATATTTCTCCATCAGGGCCTAATCCTATAATGGTGCAGCCTTTCCCACTTCAAACAAACTCCCTGTTTGGTGGCTCTGTTCCTTCTTCAATTCCTGCAACATTTGGTACAGTTGGTGTCGGAAATGCCCCTCGGAATGTGAACATCCATATACATGCCGGTACTTCTCTTGCGCCAATTGTCTCAGCAATTGGTTCTAGGCCAAATAATGGGGAAGGGGCACCAAATGAACGACGTAATGCTCCTGGCTCTGGTGATTTAGGCTCAATGCGTGCTTTACCTGTGAGAAATATCATTGCAGCAGCTGTACCTGCATACCCTCCTGGTGCTGCTGGGACCATTAGTGGCACACAGTCTAGTGGTGTTCCTACTTCACAACCACCTTCTGATTCAGCTGCATTATCATCTGTTATAGCTGATATCAATTCTCGTGCTAGAAACTTTCTAGGAAATATGCGAGGAGATAATACAGTTCTGTCAGGTCAAGCAGAATCAACCAACTGGGACTTACCTGTTGGAAGGGAATCACGCACTACTCCTGAAAATGAAAGGCTAGATACCATGGAGGCAAATGCTGTTGAAGCTTCCAGTGTGTCTCCAGTTGCTCGCGCATCTGAAAGTGGAGTACGTAAGCCGCAGCCCGAGGCAGCTCAAACTTCTAACAATGAGGAGAGAGATGTTTTGAGCAACACATTCGGTTCAACTTCTTCCAATCAAGATTCATTAAGTTGGTCAAGAGGAGAAAAATTAGGGAACTCAGAAGATGCACAAGAAAATGCTAAATCTGCTGGTGAAAAACCTGCAACTGAAACCGCCAAAGCTGTTCCTCTAGGACTGGGTGCAAGTGGCTTAGAGCGTAAGAGGAGAACGAAACTGCAACATCCTGTAAGTAGAGGGGCTGATGATGGATCAGAGAGTTCTTCTGGTAATCAAAATCAGCAATCCAGGACAAGTGGTCATAATGTATTGCAAGCTCTTGCAAGTCACGGAACTTCTATGAACCAGAGAAATGCTAATGGTCCATCCCAAGTGCCTGCTTCCCCTGGTGATGGCCAGATTGATGTAGCGGGTGTTATGTCTCAGGTCTTGCATAGCCCTGCTTTAAATGGTTTGTTGGCAGGGGTTTCACAGCAGACTGGAGTGGGCTCACCTGATGTCTTGAGGAACATGTTGCAGCAGTTCACTCAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGCCCAACAGGTTGGCAGTCAGAATATGGGGAACATGTTTGATGGAATGGAAAGAGGGCAAAGTAGTGGCATTGACTTTTCAAGGATGCTTCAACAGATGATGCCCATTGTATCTCAAGCTCTTGGAGGTGGAACTCCTCAGTCATTCTCTGCTGAAAGGAGAGATCAGGCTTTCTATGGAGATGGAACTCATAGCAGAAATGAAAGTATTGATGATCAAAGTTTACAGATCAATCTTCAACCAGTGGTAGAGAGGATGGAACACCTTAATACACAGTCAGATGTTTTTCGTATGGTGGTTCAAAATGCTATGCAGTTATCAAGAAGGGGAAGTTCTTATGATGGCCTTCTGGATGAGTTGTGTGGCGATGAGTGTCTGCCCTCTGACTATGTGGAGATGTTACGTCATGATGTGAGTCGGCGGTTGAATAGGAATTCTGGGAGAGACTAA 2814 0.4566 MAGQSSNDSPSASNVSTELSDSNVQLNVKTLDSHIYSFQVDKNMLVSLLKEKIANETGVPVGQQRLIFRGKVLKDNHVLSEYHVENGDTLHLVQRQLNQSQAPGTSSGETTGTSGDRGNDASSGSLHNRVGQISHSVVLGTFNVGDQGEGVVPDLGRVIGAVLNSIGIGGQSNGGVATGTQSSSGPLGNEAGRTHLENQNQSGNQAQTGQTFPNQPFPSLPQVVQIPLAAGSTTLPSLSAPIPHSLDTLSEFINRMEQTLSQNGYQTNSSSVSGREQTHVELPSNQQGLPTVEALSAVLHRAERLLSGHAIAALSHIAGRLEREGTTSDPNIRGQIQSESMQIGLAMQHLGAFLLELGRTILTLRMGQSSVESAVNAGPAVYISPSGPNPIMVQPFPLQTNSLFGGSVPSSIPATFGTVGVGNAPRNVNIHIHAGTSLAPIVSAIGSRPNNGEGAPNERRNAPGSGDLGSMRALPVRNIIAAAVPAYPPGAAGTISGTQSSGVPTSQPPSDSAALSSVIADINSRARNFLGNMRGDNTVLSGQAESTNWDLPVGRESRTTPENERLDTMEANAVEASSVSPVARASESGVRKPQPEAAQTSNNEERDVLSNTFGSTSSNQDSLSWSRGEKLGNSEDAQENAKSAGEKPATETAKAVPLGLGASGLERKRRTKLQHPVSRGADDGSESSSGNQNQQSRTSGHNVLQALASHGTSMNQRNANGPSQVPASPGDGQIDVAGVMSQVLHSPALNGLLAGVSQQTGVGSPDVLRNMLQQFTQSPQMRNTVNQIAQQVGSQNMGNMFDGMERGQSSGIDFSRMLQQMMPIVSQALGGGTPQSFSAERRDQAFYGDGTHSRNESIDDQSLQINLQPVVERMEHLNTQSDVFRMVVQNAMQLSRRGSSYDGLLDELCGDECLPSDYVEMLRHDVSRRLNRNSGRD 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2646 937 MobiDBLite consensus disorder prediction 170 219 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 495 514 - -
Mibi08g2646 937 CDD Ubl_ubiquitin_like 26 93 - -
Mibi08g2646 937 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 935 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 443 470 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 98 127 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 681 700 - -
Mibi08g2646 937 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Mibi08g2646 937 MobiDBLite consensus disorder prediction 713 727 - -
Mibi08g2646 937 PRINTS Ubiquitin signature 55 75 IPR019956 -
Mibi08g2646 937 PRINTS Ubiquitin signature 76 97 IPR019956 -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 665 679 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 593 631 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 713 734 - -
Mibi08g2646 937 Gene3D - 12 108 - -
Mibi08g2646 937 SMART ubq_7 24 95 IPR000626 GO:0005515
Mibi08g2646 937 MobiDBLite consensus disorder prediction 533 554 - -
Mibi08g2646 937 FunFam Large proline-rich protein BAG6 16 109 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 1 21 - -
Mibi08g2646 937 MobiDBLite consensus disorder prediction 533 700 - -
Mibi08g2646 937 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Mibi08g2646 937 SUPERFAMILY Ubiquitin-like 19 97 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2646 Mibi-ChrMibi08 44270430 44281164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2646 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 40.278 2.25e-11 60.5