Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2635 ATGGGGGACACAGAGAGTTGCAGTAATAGAGGTCAGAATTCAGGGCGGAATAATAGACGAAAGCAGAGTCAAAAGGTTGAAGTTTACAACGAGGTTCTTAGTAGACTTAAGGAATTGAATGTCCCGGAGGCTGTGGTTCCTGGTTTTGAAGATGAGCTTTGGACACATTTCTATCGACTTCCAGCTAGGTATGCTGTTGATGTGAATATGGAGAGAGCTCAAGATGTGATTATGCACAAAAGGTTGCTGCATATGGCACATGATCCTGCAACCAGACCTGCGGTTGAAGTCCGCCTAGTTCAGGTAATTCATATTCATGTGACAAATCATAGCAAGATCAAGTTCAATCTTCGATGCTGTACTCTTTTCTTTTCATCTACGCTTCACTGTGCTAGCAAGTTCCATCTGCTTCTGGTGCCAATTCATGTGTTTCTTTTCATTCAAACTCACAAAGAAAAGTCAGTCATCAAGATTCTCAGATCACTAGCAACACGAGCTCCGGCCTTTGGTTCCTTAGCTAACTTGGAACTTGCTCTTGAAGCAAGTCAGTTAAAAGTTCAATGTAATAGTAGCAATTCGAAATTCTATACACAATGTTCCCGAGCAATGCATGAGATCACGGTATCAACAAATGACAAGCCAAAATTTCTCAGTCAGTTGACTTCCCTGCTGTCTGAAACTGGGTTGAATATCCAAGAAGGACATGCTTTTTCAACATTAGACGGTTATTCATTTGATGTTTTTGTTGTTGGTGGTTGGCCTATTGAGGAGACTGAGAGGCTTAAACATGTGCTGACAAATAAAATTCAAAAACTTGAGCAGCAGCCTTCCTGCACGAAAATTGACAGTCAAACCATAGATCAAGAACAAATCAAGATCAATGTTATCTCTAAAATTGTGAATCAACCCTTATGTGGAAGTGTTGCCTGGAAAATCGATTCAAGCTGTTTGAAATATGAAAGGAAAATTGCATCTGGACCTTTCTTCGATTTGTATAAAGGTGTTTTCATAAACCAAGAAGTAGCTATCAAAGTTCTGAAGGCTGAAAATCTGAATGAAAATATACAAAGGGAGTTTGCTCAAGAGGTCTCTATTCTGAGTAAATTGTGTCACAAGAATGTTGTCAAATTTGTGGGGGCTAGTACAAAGCCTCCAGATCTATTCATTGTCACAGAATACATGTTTGGAGGAAGTCTGTACGAGTATCTGCATACACAGAAGGCTATGCTTACTCTTTCATCTCTTATCAAAGTAGCGATCAATGTTTGTGAAGGAATGAATTATTTGCATCAGAAAGACATTATACATAGGGATCTCAAGACTGCGAATCTTTTGATGGATAAAAATGGGGTAGTGAAGGTTGCTGATTTTGGTGTAGCAAGAGTGGAAAATCAGTCTGGCATTATGACTGCAGAAACTGGAACTTATAGATGGATGGCTCCAGAGGTTATTGAACATAAACCATATAATCACAAAGCCGATGTGTTCAGCTTTGGAATTACACTGTGGGAGCTGCTCACAGGAAAGCAGCTTCCATACGAGCATTTGTCACCGTTGCAAGCAGCTGTCGGAGTGGTCCAGAAGGGGTTGAGACCCAATATACCGAAACATGCGCATCCAATGTTAGTAGAGTTGATTAATCGTTGTTGGCGCCAGGATCCTTCTCTGAGGCCCGAATTCTCAAAAATTCTGGAATTTCTTGACCATTTTTTCCAGAATCAGGTTGCCGGCGAAGTTGCCACTGACGCCATGAGAGCCAACGCATAA 1767 0.4086 MGDTESCSNRGQNSGRNNRRKQSQKVEVYNEVLSRLKELNVPEAVVPGFEDELWTHFYRLPARYAVDVNMERAQDVIMHKRLLHMAHDPATRPAVEVRLVQVIHIHVTNHSKIKFNLRCCTLFFSSTLHCASKFHLLLVPIHVFLFIQTHKEKSVIKILRSLATRAPAFGSLANLELALEASQLKVQCNSSNSKFYTQCSRAMHEITVSTNDKPKFLSQLTSLLSETGLNIQEGHAFSTLDGYSFDVFVVGGWPIEETERLKHVLTNKIQKLEQQPSCTKIDSQTIDQEQIKINVISKIVNQPLCGSVAWKIDSSCLKYERKIASGPFFDLYKGVFINQEVAIKVLKAENLNENIQREFAQEVSILSKLCHKNVVKFVGASTKPPDLFIVTEYMFGGSLYEYLHTQKAMLTLSSLIKVAINVCEGMNYLHQKDIIHRDLKTANLLMDKNGVVKVADFGVARVENQSGIMTAETGTYRWMAPEVIEHKPYNHKADVFSFGITLWELLTGKQLPYEHLSPLQAAVGVVQKGLRPNIPKHAHPMLVELINRCWRQDPSLRPEFSKILEFLDHFFQNQVAGEVATDAMRANA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2635 588 ProSiteProfiles Protein kinase domain profile. 317 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2635 588 Coils Coil 255 275 - -
Mibi08g2635 588 FunFam Kinase suppressor of Ras 1 307 394 - -
Mibi08g2635 588 CDD STKc_MAP3K-like 323 567 - -
Mibi08g2635 588 Pfam Protein tyrosine and serine/threonine kinase 317 567 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 SMART serkin_6 317 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2635 588 Coils Coil 338 358 - -
Mibi08g2635 588 Gene3D Phosphorylase Kinase; domain 1 306 394 - -
Mibi08g2635 588 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 187 572 - -
Mibi08g2635 588 MobiDBLite consensus disorder prediction 1 24 - -
Mibi08g2635 588 MobiDBLite consensus disorder prediction 1 19 - -
Mibi08g2635 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Mibi08g2635 588 SUPERFAMILY ACT-like 203 276 IPR045865 -
Mibi08g2635 588 PRINTS Tyrosine kinase catalytic domain signature 493 515 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 PRINTS Tyrosine kinase catalytic domain signature 474 484 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 PRINTS Tyrosine kinase catalytic domain signature 538 560 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 PRINTS Tyrosine kinase catalytic domain signature 391 404 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Mibi08g2635 588 ProSiteProfiles ACT domain profile. 205 288 IPR002912 -
Mibi08g2635 588 Gene3D Transferase(Phosphotransferase) domain 1 396 586 - -
Mibi08g2635 588 SUPERFAMILY Protein kinase-like (PK-like) 302 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2635 Mibi-ChrMibi08 44087902 44092735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2635 5 582 MAP Kinase Kinase Kinase AT4G35780 52.151 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi08g2635 PK_Tyr_Ser-Thr 1e-70 CL0016