Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2629 ATGGGGTTATGCTTCGGCAAACCCTCCTCTGATTCACCATCCCCTCGTCACCACCACCACCACCACCATGCTCCTCATCCCACCCATCCTTCCTCTTCAACCTCTTCCTCTCAGCCTCACGTGGGTCCCGTTCTGGGAAAACCTTACTTTGACATCAGGACGCTGTACACTCTGGACAAAGAACTGGGAAGAGGGCAGTCTGGCGTCACATATCTCTGCACCGAAAAGCTCACCGGACTAAGGGACCTTAAGCCTGAGAATTTCTTATTGGCCACCACCCACCCTCATGCTCCCTTGAAAGCCGTGGATTTTGGCCTCTCTGTCTTCATTGAACAAGGTATAGAGTATAAGGAAGTTGTGGGGAGTGCGTACTATGTGGCCCCGGAGGTTCTAAGACGTAGTTATGGAAAGGAGATAGACGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTTAGTGGAGAGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATACTATTCTGGAAGGCAAATTGGATCTGGAAAGCCAACCATGGCCTTCTATTTCAGCTTCTGCCAAGGATTTGATAAGGAAAATGCTGACATATGATCCCAAGAAACGCATTACAGCTGCTGATGCCCTTGAACATCCGTGGATGAAGGTGGGTGGTCAAGCATCTGACAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTTAGAGCAATGAACAAAATGAAGAAACTCGCCCTGAAGGTGATAGCAGAAAACCTCTCAGAGGAAGAAATCAAGGGCTTAAAACAAATGTTCAACAATATGGATACGGATAACAGTGGTACGATCACACTTGAAGAACTCAGAGTTGGATTGACCAAATTGGGATCTAAACTTAACGAATCTGAGATACGGCAGCTGATGGATGCGGCTGATGTGGACAAGAATGGAACTATTGATTATTATGAATTCATAACTGCCACCATGCATCGTCATAGACTTGAGAAGGAAGAAAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGATTCATCACAAGAGAGGAGCTTAGGCAGGCTTTGACTGAATATGGAATGGGGGATGAAGCTACAATAGACGAAGTGATTGATGACGTGGACACGGATAAAGATGGCAGAATTAATTACGAAGAGTTCGTGGCTATGATGAAGAACGCGGGATGA 1200 0.4583 MGLCFGKPSSDSPSPRHHHHHHHAPHPTHPSSSTSSSQPHVGPVLGKPYFDIRTLYTLDKELGRGQSGVTYLCTEKLTGLRDLKPENFLLATTHPHAPLKAVDFGLSVFIEQGIEYKEVVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLSGEPPFWAENEKGIFDTILEGKLDLESQPWPSISASAKDLIRKMLTYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDNSGTITLEELRVGLTKLGSKLNESEIRQLMDAADVDKNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGFITREELRQALTEYGMGDEATIDEVIDDVDTDKDGRINYEEFVAMMKNAG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2629 399 MobiDBLite consensus disorder prediction 1 40 - -
Mibi08g2629 399 Pfam Protein kinase domain 81 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2629 399 Pfam EF-hand domain pair 264 324 IPR002048 GO:0005509
Mibi08g2629 399 Pfam EF-hand domain pair 333 396 IPR002048 GO:0005509
Mibi08g2629 399 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Mibi08g2629 399 SMART efh_1 263 291 IPR002048 GO:0005509
Mibi08g2629 399 SMART efh_1 299 327 IPR002048 GO:0005509
Mibi08g2629 399 SMART efh_1 335 363 IPR002048 GO:0005509
Mibi08g2629 399 SMART efh_1 370 398 IPR002048 GO:0005509
Mibi08g2629 399 PANTHER SERINE/THREONINE-PROTEIN KINASE 81 391 - -
Mibi08g2629 399 SUPERFAMILY EF-hand 255 395 IPR011992 -
Mibi08g2629 399 FunFam Calcium-dependent protein kinase 1 224 399 - -
Mibi08g2629 399 ProSitePatterns EF-hand calcium-binding domain. 308 320 IPR018247 -
Mibi08g2629 399 ProSiteProfiles EF-hand calcium-binding domain profile. 259 294 IPR002048 GO:0005509
Mibi08g2629 399 FunFam Calcium-dependent protein kinase SK5 126 221 - -
Mibi08g2629 399 Gene3D - 223 398 - -
Mibi08g2629 399 ProSiteProfiles EF-hand calcium-binding domain profile. 367 399 IPR002048 GO:0005509
Mibi08g2629 399 Gene3D Transferase(Phosphotransferase) domain 1 67 219 - -
Mibi08g2629 399 ProSiteProfiles EF-hand calcium-binding domain profile. 295 330 IPR002048 GO:0005509
Mibi08g2629 399 ProSiteProfiles EF-hand calcium-binding domain profile. 331 366 IPR002048 GO:0005509
Mibi08g2629 399 SUPERFAMILY Protein kinase-like (PK-like) 35 231 IPR011009 -
Mibi08g2629 399 SMART serkin_6 56 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2629 399 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Mibi08g2629 399 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2629 399 ProSitePatterns EF-hand calcium-binding domain. 344 356 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2629 Mibi-ChrMibi08 44046192 44050229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2629 30 79 EF-hand Containing Proteins AT3G20410 50.000 1.47e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi08g2629 Pkinase 2.2e-38 CL0016