Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2627 ATGACTCAAGACGTGGAAATGAAAGAGCATGCTACTCCATCGCATTCTGTTTCTTCAGCTGTTCCGTCCACTCTGCAGCATTTGAAGGAAATAGCATCCCTTATTGAGACCGGTTCCTATTCAAAGGAAGTTCGTAGAATTGCTCGTGCTATTCGCCTTACAATTGCTTTGAGGCGGAAATTGACAGCATCGGTGCTCTCATCTTTTCTTGATCACGTTCTTACTCCAGGCACTGAGGCTCACGCCAGATTGTCTGCCTATGTTCCCAAGGAGGATGAGCATGAGATGGAAGTGGATACTGCAACATCTGCTGTTCAAATTCCATCTAAACACCTACTGCCTGAGCTAGAAATCTACTGCTACTTGCTCGTACTACTGTTTCTTATTGATCAGAAAAGATACAATGAGGCCAAGACCTGTTCCTCAGCGAGTATTGGTCGCCTGAAGAATCTGAACAGAAGAACTGTTGATGTCATTGCTTCAAGACTATACTTCTATTACTCATACAGCCATGAACTTACAGGAGACCTTGCTGAAATTCGGGGCAACCTCCTTGCATTGCACCGTATTGCCACGCTCCGTCATGATGAGCTGGGTCAGGAAACACTTCTTAATCTGTTACTTCGTAATTACCTCCAGTACAATTTGTATGACCAAGCAGAGAAGTTAAGGTCTAAGGCACCACGATTTGAAGCACATTCAAACCAGCAGTTCTGTCGATATCTCTTCTACCTTGGGAAGATCCGTACCATACAGTTGGAGTATACCGATGCAAAAGAGTCACTCCTGCAGGCTGCCCGAAAAGCTCCAGTTGCAGCACGAGGCTTTCGAATTCAATGTAATAAGTGGGCTGTAATTGTGCGCCTGCTGTTGGGGGAAATACCTGAAAGGACTATCTTTATGCAGAGAGGAGCAGAGAAAGCCTTGAGGCCTTACTTTGAGCTTACAAACGCAGTGCGCATTGGTGACCTGGAGCTATTTAGGAATGTTGCAGAAAAGTTTGCTGCCACCTTTAGTACAGATGGAACTCATAATTTGATTGTTCGGCTGCGACATAATGTTATCCGAACTGGTTTACGCAACATCAGCGTGTCTTATTCTCGCATCTCGCTTGCTGATGTAGCTCAAAAATTGAGGTTGAACTCTGCGAACCCTGTTGCAGATGCTGAGAGCATTGTAGCCAAGGCCATCCGTGATGGGGCAATTGATGCTACATTGGATCATGCTAACGGGTGGATGGTATCCAAGGAAACTGGAGATATTTACTCCACAAACGAACCTCAAATAGCTTTCAATTCTCGGATTGCCTTCTGTCTTAACATGCACAATGAAGCCATTAGGGCACTGCGTTTCCCACCTAACACACACAAGGAAAAGGAAAGTGCTGAGAAAAGGAGGGAGAGGCAACAGCAAGAGCAAGAATTGGCCAAGCACATAGCAGAGGAGGATGATGACGATTTCTGA 1464 0.4542 MTQDVEMKEHATPSHSVSSAVPSTLQHLKEIASLIETGSYSKEVRRIARAIRLTIALRRKLTASVLSSFLDHVLTPGTEAHARLSAYVPKEDEHEMEVDTATSAVQIPSKHLLPELEIYCYLLVLLFLIDQKRYNEAKTCSSASIGRLKNLNRRTVDVIASRLYFYYSYSHELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLQYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTIFMQRGAEKALRPYFELTNAVRIGDLELFRNVAEKFAATFSTDGTHNLIVRLRHNVIRTGLRNISVSYSRISLADVAQKLRLNSANPVADAESIVAKAIRDGAIDATLDHANGWMVSKETGDIYSTNEPQIAFNSRIAFCLNMHNEAIRALRFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2627 487 MobiDBLite consensus disorder prediction 451 480 - -
Mibi08g2627 487 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 4 478 - -
Mibi08g2627 487 SUPERFAMILY "Winged helix" DNA-binding domain 346 421 IPR036390 -
Mibi08g2627 487 MobiDBLite consensus disorder prediction 451 487 - -
Mibi08g2627 487 SMART PINT_4 345 438 IPR000717 -
Mibi08g2627 487 ProSiteProfiles PCI domain profile. 239 420 IPR000717 -
Mibi08g2627 487 Pfam Proteasome regulatory subunit C-terminal 420 486 IPR013586 GO:0000502|GO:0030234|GO:0042176
Mibi08g2627 487 Gene3D - 242 436 - -
Mibi08g2627 487 FunFam 26S proteasome non-ATPase regulatory subunit 3 120 443 - -
Mibi08g2627 487 MobiDBLite consensus disorder prediction 1 21 - -
Mibi08g2627 487 Pfam PCI domain 311 416 IPR000717 -
Mibi08g2627 487 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 345 438 - -
Mibi08g2627 487 Coils Coil 454 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2627 Mibi-ChrMibi08 44014287 44017456 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2627 08 44014287 44017456 Mibi05g1382 05 16419555 16431101 CCT
Mibi08g2627 08 44014287 44017456 Mibi08g2627 08 44014287 44017456 ECH