Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2625 ATGGCTAATCACACACAGACTGTCTCAGGATGGGCTGCCCACGATTCTTCGGGCAAAGTTACCCCTTTCTCTTTTCAACGACGGGAGAACGGCGCTAACGACGTGACCATACAGATATTGTACTGTGGGATCTGCCACACGGACCTTCACTACGTTAAAAACGACTGGGGCATCACCATGTACCCCGTAGTTCCCGGGCACGAGATCGTAGGGGTGATAACGAAGGTGGGAAGCAACGTGAAGGGGTTCAAGGAAGGGGACAGAGCAGGGGTGGGGTGCCTGGCCGCCACGTGCCTCGACTGTGAATACTGCAACAGCGATCAGGAGAACTACTGCCAACAACTGCAGTTCACATACAACGGCATCTTCTGGGACGGCACCGTCACCTACGGCGGCTACTCCACCATGATAGTCGCCGATCACAGATACGTGGTGCGCATACCGGAGAAGCTGAGGATGGAAGGGGCGGCGCCTCTGCTGTGCGCGGGGATAACGGTGTTCAGTCCGATGAAGGATCACGGGCTGGTGGAGGAGGGAGGGGGGAAGAGGATAGGGGTGGTGGGCCTTGGTGGGCTGGGCCACATCGCAGTCAAATTTGGCAAGGCCTTTGGCCACCACGTCACCGTCATCAGCCGCTCGCCCGACAAGGAGTGGGAGGCAAAGCACACCCTTGGAGCCGATGAGTTCATAGTGAGCAGCGACCAGAAGCTGATGGAGGAAGGGAAGAGGAGTATGGATTTCATATTGGATACTGTGTCTGCGCAGCATTCTCTGCTGCCCCTCCTGGAATTGCTCAAGATCAACGGCACTCTGTTCATCGTGGGTGCCCCCAACCAGCCCCTCCAGCTCCCTGCCTTCCCCCTCATATTCGGCAAGAGGTCCGTCAAGGGAGGCATCATCGGAGGCATCAAGGACACTCAGCAAATGTTGTACCTCTGTGAGAAGCACAACATCACCTGCGACACCGAGTTGATAAGGCCCCACCAAATCAACCACGCCTTCCACCGCCTCGCCAACAACGATGTCCGTTACCGTTTTGTCATTGACATTGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCCCTTCCTGA 1089 0.573 MANHTQTVSGWAAHDSSGKVTPFSFQRRENGANDVTIQILYCGICHTDLHYVKNDWGITMYPVVPGHEIVGVITKVGSNVKGFKEGDRAGVGCLAATCLDCEYCNSDQENYCQQLQFTYNGIFWDGTVTYGGYSTMIVADHRYVVRIPEKLRMEGAAPLLCAGITVFSPMKDHGLVEEGGGKRIGVVGLGGLGHIAVKFGKAFGHHVTVISRSPDKEWEAKHTLGADEFIVSSDQKLMEEGKRSMDFILDTVSAQHSLLPLLELLKINGTLFIVGAPNQPLQLPAFPLIFGKRSVKGGIIGGIKDTQQMLYLCEKHNITCDTELIRPHQINHAFHRLANNDVRYRFVIDIASASASASASPS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2625 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Mibi08g2625 362 SUPERFAMILY GroES-like 13 179 IPR011032 -
Mibi08g2625 362 Gene3D - 162 320 - -
Mibi08g2625 362 Pfam Zinc-binding dehydrogenase 191 313 IPR013149 -
Mibi08g2625 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 318 IPR036291 -
Mibi08g2625 362 Gene3D - 11 350 - -
Mibi08g2625 362 PANTHER ALDEHYDE REDUCTASE 3 352 - -
Mibi08g2625 362 Pfam Alcohol dehydrogenase GroES-like domain 33 146 IPR013154 -
Mibi08g2625 362 FunFam probable cinnamyl alcohol dehydrogenase 11 170 - -
Mibi08g2625 362 FunFam Cinnamyl alcohol dehydrogenase 162 320 - -
Mibi08g2625 362 CDD CAD1 10 349 - -
Mibi08g2625 362 SMART PKS_ER_names_mod 13 348 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2625 Mibi-ChrMibi08 44008376 44009811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2625 10 360 Monolignol Biosynthesis Gene Families AT2G21730 58.807 7.28e-147 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2625 08 44008376 44009811 Mibi08g2625 08 44008376 44009811 ECH