Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2608 ATGCAAAGGCCTTTACAATTTACTGACATAATCGGTTCATGGAAACGACCGTTGCCTGCTCTTCGCCTTAGTTTTCGCACATCTCGATGCTTTCTAGCATTAGCCACTGCAATCATACTGGCTTCCCTCAGATTCGCCTTCTTCTCCCTCTTCTTCATTATTCATTTCTCACTGGCACTGCACTTTGTCTCCGTAGACTTCGGGATGGACGGCCTTACATTGCTGTATTCCTTTCTATTAACACTTCATATATCGGCATCAGGAGTGATTTCAACTACATTCACAATGGTGAACAAATGCGAGTACACGGTATGGCCGGGCATACTATCGAACGCCGGAGTTACGCCTCTTCCGATTACCGGTTTCGTTCTTCAAACGGGTGAATCCAAGACGATCTCTGCACCCACCTCTTGGGGAGGTCGCTTCTGGGGAAGAACTCTCTGCTCCCAAGACTCCACCGGCAAGTTCTCCTGCGTCACAGGCGATTGCGGCTCCGGCACCGTGGAATGCGCCGGCAACGGAGCCACACCGCCTGCCACGCTGGCAGAATTCACTCTGAACGGCGACGGAGGGCTTGATTTCTTCGATGTGAGTTTGGTAGACGGTTACAACGTCCCTATGCTGGTGGTCCCCCAAGGTGGCTCAGGCTCAGGCGATAACTGCTCCTCCACGGGATGCGTCGTGGATCTCAATGGCGCGTGCCCTTCAGAGCTCAAGGTCGCGAGTGTCGATGGGAACCAAGGCGTGGCCTGTAAGAGCGCCTGCGAGGCCTTCGGATCCCCCGAGTACTGTTGCAGTGGTGCCTACGCCACGCCAGATACGTGCAAGCCATCCTCCTACTCTCAGATCTTCAAAACCGCATGCCCACGCGCCTACAGCTACGCGTATGACGATAAGACGAGCACCTTTACGTGCGCCTCCGCAGATTACACCATAACCTTCTGTCCCACACCTAACACCAGCCAGAAGGCATCGGAAGGAGGGGAAGATGCATCAACATCGTCCATGAGTAACAACAGCACTATTGTGTACGAAGGAGCTGCTGGTCAGAGCGAAATATCAAAGGGGGGGACCCACTTGTTGAGATTCGGGCCCATTGCTCGCGTGGCAGTGACCGTTTGCCTTTTTTGCATCCTCCTGTGA 1143 0.5372 MQRPLQFTDIIGSWKRPLPALRLSFRTSRCFLALATAIILASLRFAFFSLFFIIHFSLALHFVSVDFGMDGLTLLYSFLLTLHISASGVISTTFTMVNKCEYTVWPGILSNAGVTPLPITGFVLQTGESKTISAPTSWGGRFWGRTLCSQDSTGKFSCVTGDCGSGTVECAGNGATPPATLAEFTLNGDGGLDFFDVSLVDGYNVPMLVVPQGGSGSGDNCSSTGCVVDLNGACPSELKVASVDGNQGVACKSACEAFGSPEYCCSGAYATPDTCKPSSYSQIFKTACPRAYSYAYDDKTSTFTCASADYTITFCPTPNTSQKASEGGEDASTSSMSNNSTIVYEGAAGQSEISKGGTHLLRFGPIARVAVTVCLFCILL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2608 380 CDD TLP-PA 93 315 - -
Mibi08g2608 380 SMART tha2 94 316 IPR001938 -
Mibi08g2608 380 FunFam THAUMATIN-LIKE PROTEIN 1 92 316 - -
Mibi08g2608 380 Gene3D Thaumatin 92 316 IPR037176 -
Mibi08g2608 380 ProSitePatterns Thaumatin family signature. 154 170 IPR017949 -
Mibi08g2608 380 Pfam Thaumatin family 98 316 IPR001938 -
Mibi08g2608 380 PRINTS Pathogenesis-related protein signature 306 315 IPR001938 -
Mibi08g2608 380 PRINTS Pathogenesis-related protein signature 193 209 IPR001938 -
Mibi08g2608 380 PRINTS Pathogenesis-related protein signature 93 105 IPR001938 -
Mibi08g2608 380 PRINTS Pathogenesis-related protein signature 141 152 IPR001938 -
Mibi08g2608 380 ProSiteProfiles Thaumatin family profile. 91 316 IPR001938 -
Mibi08g2608 380 PANTHER OS03G0233200 PROTEIN 77 316 IPR001938 -
Mibi08g2608 380 SUPERFAMILY Osmotin, thaumatin-like protein 92 316 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2608 Mibi-ChrMibi08 43828658 43831833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2608 69 334 Receptor kinase-like Gene Family AT5G38280 52.574 1.19e-94 295