Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2599 ATGGCTCTTCTTACTTTCTTGCCGGAACAGTCACAATCGGACCCCAATCCACAGATTCAAAAACGCAAGAAGAGAAATAAGGCGCAGAAGAAGCAGAAGCAGAAAGCAGCGTCGTCATGGGACCAAATAAAGAACATCCTGACCTGTAAACAGATCCAAGGGTCGAGAGTTCACGACCCTTCCAAAAATACCAACACCCAACCGCCGTACTCAAAGCTAGGATCTTCCTGCAGCTCCATCTGTAACTTCAAAGATGTTGTTCATGGCAACACGCGTGTTGTTCACAGACCTGATACCTCCTCGCCGGAGAGCAGTGCCCTTGGTCACCAAACCGGCCTCCTCAGCCGGAAGCCTCCCAAATCCAACACCGCCATATCCTCCAGAGGGATGCAATTCAGGAAACTCTCCGGCTGTTACGAGTGCCGCATGATCGTTGACCCTTCCAGGCTGCCGGTTCCGAGAAGCACTCTATGTTCTTGCCCTCACTGTGGAGAGGTCTTCCCGAAGATGGAAAGCTTGGAGGTACATCAGGCTACTCGCCATGCCGTTTCAGAGCTGGATGCAGAGGATTCGGGAAGAAACATAGTGGAGATAATATTCAAATCGAGCTGGCTGAAGAAGGGAAGCCCCATCTGTAAGATCGAACGGATACTAAAAGTCCACAACAGCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCGGTCAAGAGCCGCGCTCAGTACAGCGTGAAGAAGAATCCAAGGTGCGCAGCCGACGGCAACGAGCTATTGCGATTCCACTGCACCACCCTCTCTTGCTCCCTCGGCGCACGTGGCTCCTCCTCCTTGTGCTCCTCCGTCCACGGCGGATGCGCCGTCTGCGCCGTCATCCGCCACGGCTTCCAGGGGGAGCAGCCGCCGCGGAAGGGGGTGAGGACGACGGCCAGCAGCGGTAGGGCCCACGACGCGTTGAGGTGTGGGGACAGCGGTAGCAGGAGGGCGATGCTGGTGTGCCGCGTGATCGCCGGGAGGGTGAAGCGCGTGGCGGAGGAGGAGGAGACTGTGGCGGCGGGGTCTTATGACTCGGTGGCTGGCAGCGCCGGGATTTACTCGAATCTCGAGGAGTTGGTGGTGTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTTGTCATTTACAAAGTTGAGGAAGCTCTTCCTTGTTGA 1188 0.5623 MALLTFLPEQSQSDPNPQIQKRKKRNKAQKKQKQKAASSWDQIKNILTCKQIQGSRVHDPSKNTNTQPPYSKLGSSCSSICNFKDVVHGNTRVVHRPDTSSPESSALGHQTGLLSRKPPKSNTAISSRGMQFRKLSGCYECRMIVDPSRLPVPRSTLCSCPHCGEVFPKMESLEVHQATRHAVSELDAEDSGRNIVEIIFKSSWLKKGSPICKIERILKVHNSQRTIQRFEECRDAVKSRAQYSVKKNPRCAADGNELLRFHCTTLSCSLGARGSSSLCSSVHGGCAVCAVIRHGFQGEQPPRKGVRTTASSGRAHDALRCGDSGSRRAMLVCRVIAGRVKRVAEEEETVAAGSYDSVAGSAGIYSNLEELVVFNPKAILPCFVVIYKVEEALPC 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2599 395 ProSitePatterns Zinc finger C2H2 type domain signature. 158 181 IPR013087 -
Mibi08g2599 395 Gene3D - 181 389 - -
Mibi08g2599 395 FunFam C2H2-like zinc finger protein 182 388 - -
Mibi08g2599 395 MobiDBLite consensus disorder prediction 1 17 - -
Mibi08g2599 395 SUPERFAMILY ADP-ribosylation 183 388 - -
Mibi08g2599 395 MobiDBLite consensus disorder prediction 1 39 - -
Mibi08g2599 395 MobiDBLite consensus disorder prediction 52 71 - -
Mibi08g2599 395 ProSiteProfiles Zinc finger C2H2 type domain profile. 158 186 IPR013087 -
Mibi08g2599 395 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 38 387 - -
Mibi08g2599 395 MobiDBLite consensus disorder prediction 95 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2599 Mibi-ChrMibi08 43761217 43763667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2599 1 392 C2H2 Transcription Factor Family AT1G75710 59.957 2.26e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi08g2599 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2599 08 43761217 43763667 Mibi08g2599 08 43761217 43763667 ECH