Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2576 ATGGCAGGCTTCTTCTCTCTAGGCCCACACAACAAAGAAGAAGAAGATAAACAGGATAACAACAACAATAATAATAACAGCCTATACTTGTTCAGGAACGAGGAGATCTACAGCAAAGGATTCGAGATATGGCCACAGTCGTCGTCGTATCATCAGCCGCATCACAGCCTAACCAACTTGTACTCGTTCGGGGCGGGTCCTAGTCGAAGGAACTCATCCAACGACGACGTCGTTTCGGAAGACTCAACCAGGTTCGGATTCACGGTGATGAGGTCAGGAGGTTTGGGAGGAGGTGGCATGAACTGTCAGGATTGTGGGAATCAAGCAAAGAAGGACTGTGCACATCTCAGGTGCAGGACTTGCTGTAAGAGCCGAGGGTTTCAGTGTCAGACCCACGTTAAGAGCACTTGGGTTCCCGCAGCTAAACGCCGTGAACGACAGCAACAGCTAGCCGCGTTGCAGCACCATGACCAACAATTTAGGGGGGATCATTCTAAACGACACCGAGATAATCAAGCTTCCGGTTCTCTGGCCTGCGCTCCTTTAATGCCAGTTCCTACTACTACAGGGTTGGAAGTGGGACAATTCCCACCAGAGGTGAATTCTTCGGCCGTGTTTCGTTGTGTAAAAGTGAGCGCAATGGACAGTCCAGATGACCAGTACGCGTATCAAACGGCTGTGAACATAGGAGGCCACCTCTTTAAGGGAATTCTATATGACCAAGGCCCTGAAGGTGCTTACACCACAGGTGGCGAGAGCTCCTCCGGCGGCGCCGGCGAAGCTCAACACTTAAATCTCATAACCGCGTCGACAACGACGGCGACAACCACCGCCAACCCCTTTGATCCTTCTTCGCTATACCCGGCTCCGCTCAATGCCTTCATGGCTGGTACGCAATTCTTCCCACCTCCAAGGTCCTAA 921 0.5168 MAGFFSLGPHNKEEEDKQDNNNNNNNSLYLFRNEEIYSKGFEIWPQSSSYHQPHHSLTNLYSFGAGPSRRNSSNDDVVSEDSTRFGFTVMRSGGLGGGGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQHHDQQFRGDHSKRHRDNQASGSLACAPLMPVPTTTGLEVGQFPPEVNSSAVFRCVKVSAMDSPDDQYAYQTAVNIGGHLFKGILYDQGPEGAYTTGGESSSGGAGEAQHLNLITASTTTATTTANPFDPSSLYPAPLNAFMAGTQFFPPPRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2576 306 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 195 243 IPR006511 -
Mibi08g2576 306 MobiDBLite consensus disorder prediction 1 25 - -
Mibi08g2576 306 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 292 IPR007818 GO:0003700|GO:0006355
Mibi08g2576 306 Pfam Domain of unknown function (DUF702) 99 244 - -
Mibi08g2576 306 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 101 143 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2576 Mibi-ChrMibi08 43467170 43468525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2576 1 306 C2H2 Transcription Factor Family AT1G75520 49.727 9.28e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mibi08g2576 DUF702 2e-64 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2576 08 43467170 43468525 Mibi05g1118 05 13556227 13557625 CCT