Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2575 ATGGCGGATGGAGGCTGTTGGCCGACGATGGATCTGCTTCGTTCGGAGCCAATGCAACTCGTGCAACTTATCATTCCTACTGAATCAGCTCACCGAGCCATCTCTTACCTCGGAGATCTTGGCCTCTTCCAGTTCAAAGATCTAAATGCAGAGAAAAGCCCATTTCAACGGACATATGCTGCTCAGATTAAAAGGTGTGGGGAAATGGCACGTAGGCTTCGGTTCTTCAGGGAACAAATGACAAAGGCTGGCATATCACCCTCAAGAAGGTCCACAGAAGAAACTGAAGTTGATTTGGATGATTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTGGAGAGTAATGTGAATAATGAGGAGTTGCAACACACCTACCGTGAGCTATTAGAATATGAACTTGTTCTACAAGAGGCTGGTGAATTTTTCTCTTCAGCTAAAAATAGTGCTACAGCCCACCAAAGAGAGCTTGAAGTCCAGAACACTTTTGAAGGGTCTATTGACAATCCATTACTATTGGAAAAGGAGTTGCCAACAGATCAGTCAAAGCAGCTTAAGCTGGGGTTCATCAGTGGTCTTGTTCCTAGAGCAAAATCAATGGCATTTGAAAGAATATTATTTCGTGCTATAAGGGGTAATGTGTTTCTAAAGCAAGTTCCAGTTCAGACTCCTGTTCTTGATCCTTTGTCAGCGGAGAAGATTTATAAAAATGTATTTGTTATATTTTATTCTGGAGAGAGAGCAAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCATTCACTGATGATCTGGGCAAACAATTTCAGATGACTACAGAGGTGTCAGGAAGACTTTCTGAAATGAAGACTACCATTGAGGCTGGATTGTTTCACAGCAGCACTCTTTTGCAGACAATTGGTTGTTACTTTGAGCAATGGAGCCTTCTGGTGAAGAAGCAAAAATCCATTTTCCACACTCTAAATATGCTTAGCATAGATGTAACAAAGAAATGTCTTGTAGCAGAAGCTTGGTGTCCCGTTTTTGCTACAAATAAGATTCAAGTTGCATTGCACCAGGCAACCGTGGATAGTAACTCACAAGTTGGGGTGATATTTCAAGTCCTACAAACAAAGGAATCACCACCTACATATTTCCAAACGAATAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAGTTGCTAAGTATCGGGAGGCAAACCCTGGTGTATATACGGTTATCACCTTTCCATTCCTCTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGCCTATTACTAGCAACTTTGTATTTCATTATTAGAGAGAAGAAATTTTCTACTCAGAAACTTGGAGACATAATAGAAATGACTTTTGGTGGTCGCTATGTTATTATGATGATGGCACTGTTCTCAATATACACAGGACTGATATATAATGAGTTTTTCTCTGTCCCATTTGAACTGTTTGGGCGATCTGCCTATGGATGCCGTGATCTTTCATGCAGGGATGCAACCACAATAGGCTTAATAAAGGTGCGTGGAACTTATCCATTTGGTGTGGATCCTAAGTGGCATGGTACACGGAGTGAGTTGCCATTTCTTAACTCGTTGAAGATGAAGATGTCAATCCTATTGGGAGTAGCCCAGATGAATCTCGGAATTATAATAAGCTACTACAATGCTAAGTACTTTGGAAATGACATAAATATCTGGTACCAGTTTGTTCCCCAAATGTTATTCTTAAACAGCTTGTTCGGCTACCTTTCGCTCCTCATAATTGTTAAATGGTGCACAGGATCACAAGCTGACTTGTATCATGTGATGATATACATGTTCCTAAGTCCGACCGATGATCTGGGTGAAAACCAGCTCTTTGTTGGCCAAAAGTTCCTTCAAATAGTGTTACTATTGTTGGCACTTGTTGCTGTACCATGGATGTTGTTTCCAAAGCCTTACCTCCTCAAGAAGCAGCACCAAGAAAGGCATCAAGGTCAATCCTACTCTTTGCTTTACAGCAGCGATGACCCTCTTGAACCAGAGCCACAAATCAATACCCAGGACCATGATGATTTCGAGTTCAGTGAGGTTTTTGTACACCAACTCATTCATACAATAGAATTTGTGCTTGGGGCAGTGTCTAATACAGCTTCATACCTGCGATTATGGGCCCTCAGTCTGGCACATTCAGAGTTATCAAGTGTGTTCTATGACAAAGTTCTTCTTCTTGCCTGGGGGTTCAACAACACCATTGTTCTCATTATTGGCATTGTTGTTTTCATATGCGCTACTGTTGGTGTTCTCCTGGTTATGGAAACTCTGAGTGCTTTCTTGCATGCATTGAGGCTTCACTGGGTGGAGTTCCAAAATAAGTTTTATGAGGGAGATGGTTACAAGTTCAGCCCATTTTCATTCTCTCTGCTTAATGAAGAGGATGAAATATAA 2457 0.4098 MADGGCWPTMDLLRSEPMQLVQLIIPTESAHRAISYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMARRLRFFREQMTKAGISPSRRSTEETEVDLDDLEVKLAELEAELLESNVNNEELQHTYRELLEYELVLQEAGEFFSSAKNSATAHQRELEVQNTFEGSIDNPLLLEKELPTDQSKQLKLGFISGLVPRAKSMAFERILFRAIRGNVFLKQVPVQTPVLDPLSAEKIYKNVFVIFYSGERAKSKILKICDAFGANRYPFTDDLGKQFQMTTEVSGRLSEMKTTIEAGLFHSSTLLQTIGCYFEQWSLLVKKQKSIFHTLNMLSIDVTKKCLVAEAWCPVFATNKIQVALHQATVDSNSQVGVIFQVLQTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVYTVITFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSTQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYGCRDLSCRDATTIGLIKVRGTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYYNAKYFGNDINIWYQFVPQMLFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQIVLLLLALVAVPWMLFPKPYLLKKQHQERHQGQSYSLLYSSDDPLEPEPQINTQDHDDFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIIGIVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFSLLNEEDEI 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2575 818 Coils Coil 92 126 - -
Mibi08g2575 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Mibi08g2575 818 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mibi08g2575 818 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2575 Mibi-ChrMibi08 43440689 43453306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2575 10 817 Primary Pumps ATPases(2) AT4G39080 74.166 0.0 1253