Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2571 ATGGCTGCTCTAATTTCTCCACCATTTTCGTCATCTTCTTCTTCTATCGTTCGCTTCCGTGAAACTTCCGTGTTTTCCACTCGTCTCCTCCCTCCAAGGAATCTTCAACAGAGATGCAATTCTTATAATTATGGATGGTGCGCAGTGAAGTGTAGACTTCTCAACGTCAGTGCGGCTCCTTCCTCAAGTCCTCCGACTGTGATAAAGGAACCTCACAAGTACTTTGATCAGGCAATCATCACAGTTCGTTCGGGTGATGGAGGCCACGGAGCCATACTTAGCATGCCCGATCAGAAAATTAATAGTTCACAAGGAAGACGTGAAAAGGAAAAGACAAGGAAAAAAAGCTCCTATAAAAGAGACTTTGATGGATCGCTTATCCTTCCTATGGGTGGGCATGGAGGGGATGTGGTGATTTATGCGGATGAGGAAAAAGATTCATTATTGGAATTCCACAGCAAAAGTCGATATAATGCAAAGCGTGGTGGCAATGCTGATACAATGGGTCTTTTGACCTCGCAGTTGCGTGATGGACTTGCTGCTCCAACTTTGCGCATTGCTGTGCCTGTAGGTACTGTTGTAAAACGCAAGAGAGGGAAATTGCTTGCTGATCTGGCACAACCAGGTGATGAAGTTCTTGTCGCAAGAGGTGGACAAGGAGGGATTAGCTTGTTAGATATGCCTCAACATAAAAGGAAAAAGATGATGGCATTGACAACAAATGTGTTGAGAGATGACACTGATAAGGTTTTAGTTCATGGTCAACCAGGTGAGGAAGTTAGTTTGGAGTTGATCCTACGGGTTGTGGCTGATGTTGGTCTAGTTGGACTTCCAAATGCGGGGAAATCAACACTACTGGCGGCCATTACACTAGCAAAACCTGATATTGCTGATTACCCCTTTACAACATTAATGCCAAACCTTGGACGCCTAGGTGGTGACCCGAGCTTGGGAGCGGGGATGTTCTCATCTGAAGCTACATTAGCAGATTTGCCCGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGACGAAATTTCTTGAGGCACCTCAGGAGGACCCGGGTTCTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCATCAATGATTACATAACTGTCAGGGAAGAATTGCGCATGTATAACCCTGAATACCTTGACCGACCATACGTTGTGATTTTGAATAAGATTGACCTTCCAGAGGCAAAGGACAGGCTTTCATCGTTGACCGAAGAAATACTGAGGATTGGGAACGTTTGTAAACCTTATGAACCAGAATTAACCTCTGAAGCTCCAGATCAATCATTATCCAATGAAGTTGTCATCAAGGAAAAGAAACTGGAGGATTATCCCCCACCCCTGTCCGTCGTGGGTGTTAGTGTTCTGAAGGGTATCAGGATAGATGACATGTTAAAGGAGATAAGGAAAGCTCTAAGGAAGTGTATGGATCCCACTGAAGTATCATCGGCCTTGAATCCACCCGCAGAAACTGGCAAGTGA 1506 0.4529 MAALISPPFSSSSSSIVRFRETSVFSTRLLPPRNLQQRCNSYNYGWCAVKCRLLNVSAAPSSSPPTVIKEPHKYFDQAIITVRSGDGGHGAILSMPDQKINSSQGRREKEKTRKKSSYKRDFDGSLILPMGGHGGDVVIYADEEKDSLLEFHSKSRYNAKRGGNADTMGLLTSQLRDGLAAPTLRIAVPVGTVVKRKRGKLLADLAQPGDEVLVARGGQGGISLLDMPQHKRKKMMALTTNVLRDDTDKVLVHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVLVHVVDAATENPINDYITVREELRMYNPEYLDRPYVVILNKIDLPEAKDRLSSLTEEILRIGNVCKPYEPELTSEAPDQSLSNEVVIKEKKLEDYPPPLSVVGVSVLKGIRIDDMLKEIRKALRKCMDPTEVSSALNPPAETGK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2571 501 SUPERFAMILY Obg GTP-binding protein N-terminal domain 74 236 IPR036726 -
Mibi08g2571 501 ProSiteProfiles Obg domain profile. 72 269 IPR006169 -
Mibi08g2571 501 ProSitePatterns GTP1/OBG family signature. 330 343 IPR006074 GO:0005525
Mibi08g2571 501 Gene3D GTP1/OBG domain 73 268 IPR036726 -
Mibi08g2571 501 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 70 478 IPR045086 GO:0003924|GO:0005525
Mibi08g2571 501 CDD Obg 270 480 IPR031167 GO:0005525
Mibi08g2571 501 MobiDBLite consensus disorder prediction 102 117 - -
Mibi08g2571 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 492 IPR027417 -
Mibi08g2571 501 Gene3D - 269 488 IPR027417 -
Mibi08g2571 501 PRINTS GTP1/OBG GTP-binding protein family signature 345 363 IPR006073 GO:0005525
Mibi08g2571 501 PRINTS GTP1/OBG GTP-binding protein family signature 272 292 IPR006073 GO:0005525
Mibi08g2571 501 PRINTS GTP1/OBG GTP-binding protein family signature 328 343 IPR006073 GO:0005525
Mibi08g2571 501 PRINTS GTP1/OBG GTP-binding protein family signature 293 311 IPR006073 GO:0005525
Mibi08g2571 501 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 270 481 IPR031167 GO:0005525
Mibi08g2571 501 MobiDBLite consensus disorder prediction 91 117 - -
Mibi08g2571 501 Pfam GTP1/OBG 131 267 IPR006169 -
Mibi08g2571 501 Pfam 50S ribosome-binding GTPase 271 398 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2571 Mibi-ChrMibi08 43387250 43391136 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2571 08 43387250 43391136 Mibi08g2571 08 43387250 43391136 ECH