Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2568 ATGGCGACTGGAAGAAAAAACAAAGGAGAAGAAAATAAACAGCCAAACATTAGCAAGAGTAGTGTGGCACATCGCAACAAAAATATTAGAGCAGAGGCAGAAAGAAAGAACACCACATTGCGCCTCTCGAGTTATCTTTTCAAATTTCCCTCTAATAAGCTCAGAGACATGGAAAGCATTCAGAAAATCTTAATTTCAAAGTTGCTGATATGGTTCTTCACAACCTTGTTCTTATGTTCTAAGGTTACCCAGGGCAGTGTAACTTACGATAGAAAGGCCATAATCATCAATGGACAAAGGAAAATTCTCATCTCTGGTTCCATTCACTACCCCAGAAGCACTCCACAAATGTGGGAGGATCTTATTCAGAAGGCTAAAGATGGAGGCCTAGATGTCATTGACACTTATGTCTTCTGGAATGTCCACGAACCATCTCCCGGCAAGTACAACTTTGAAGGGAGAAACGATTTGGTGCAGTTCATTAAGACAGTGCAGAAGGTGGGGCTTTATGCTCATCTTCGCATTGGGCCTTATGTGTGCGCCGAGTGGAACTACGGAGGATTTCCTGTATGGTTGAAGTATGTTCCTGGCATCAGCTTCAGAACAGACAATGGGCCTTTTAAGGCTGCAATGCAAGGCTTCACTCAGAAAATTGTCCAGATGATGAAAAGTGAGAAGCTATACCAATCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAACGAGTATGGACCAGAAGGCAGGGAACTGGGCGCCGCAGGTCGTGCATACATAAACTGGGCTGCAAATATGGCAGTTAAATTGGATACAGGAGTTCCATGGGTGATGTGCAAGGAAGATGACGCCCCAGATCCTGTGATAAATGCATGTAATGGTTTTTACTGTGATTATTTCTCTCCTAATAAACCGTACAAGCCTACCCTGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAAATCATCAGCGACCAGTTCAAGATCTGGCATTTGCAGTTGCTCGATTCATACAAAAGGGCGGCTCATTTGTCAATTATTACATGTATCATGGAGGAACTAACTTTGGACGCTCTGCTGGAGGCCCATTCATCACTACAAGTTATGATTATGATGCTCCAATTGATGAATATGGCTTGATCAGAGAACCTAAATATAGTCATTTGAAGGAGCTTCACAAAGCTATCAAGCAATGTGAACCAGCTTTGGTGTCTTCAGATCCTACTATTACATCACTAGGAACGTATCAGCAGGCTCATGTATTCTCTTCAGGGAGCGGAGCATGTGCAGCTTTTCTGGCAAACCATCATACAAAGTCTTCCGCTAGAGTGACATTTAATAACAATCACTATGATCTGCCTCCTTGGTCTATAAGCATTCTCCCTGATTGCAGAAATATTGTTTTTAACACGGCAAATGTGAGAGTTCAAACATCACAAACGCAAATGGTTCCTACGAATTCAAAAAAGTTCTCATGGGAGACCTATGATGAAGATCTATCTTCTCTGGATGAAACCTCAGGGATCACAGCGGCTGGACTCTTGGAACAAATAAACGTTACCAGAGATACTAGCGACTATCTATGGTACATTACTAGTGTGGACATCAGCTCATCGGAATCATTTCTACGAGGAGGACAGAAACCCAGTATCATCGTACAGTCGTCAGGCCATGCTGTGCATGTGTTCGTTAATGGGCAATTTTCAGGGTCTGCTTTTGGGACAAGGGAACAAAGCAGTTGCAAATTTAATGGTCCGGTCAATCTACGCGCTGGAACTAACAAAATTGCCCTTCTCAGCGTAGCTGTTGGATTACCGAATGTTGGCCTTCATTTTGAAACATGGAAGACAGGGATCAATGGTCCAGTTTTGCTTAAGGGGCTTGACCAGGGAACCAAAGATTTAACGTGGCAACAATGGTCTTACCAGATTGGGCTTAAAGGAGAGGCTATGAATTTGGTATCTCCTAATGGGGTCTCGTCTGTTGATTGGGCACGAGAGTCACTAGCGGCCCAAAACCAGCAACAACTGAAATGGCATAAGGCTTATTTTGAGGCACCAGAAGGAGATGAGGCATTAGCCTTGGACATGGGCAGCATGGGAAAAGGTCAAGTGTGGATCAACGGTGAGAGCATAGGGAGGTACTGGTTGGCTTATGCAAAAGGTGACTGCAACTCTTGCTCCTATTCTGGCACCTTCCGTCCTGATAATTGCCAACTTGGTTGTGGAGAACCCACCCAACGATGGTATCATGTTCCCAGATCCTGGTTGAAGCCAACCAACAACTTGATCGTTATTTTTGAAGAATTAGGTGGGAATCCTTGGAAAATATCTCTCTTCAAGAGAACCTTGAATACACCTCCAGCTGCTTAA 2382 0.4395 MATGRKNKGEENKQPNISKSSVAHRNKNIRAEAERKNTTLRLSSYLFKFPSNKLRDMESIQKILISKLLIWFFTTLFLCSKVTQGSVTYDRKAIIINGQRKILISGSIHYPRSTPQMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGKYNFEGRNDLVQFIKTVQKVGLYAHLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKSEKLYQSQGGPIILSQIENEYGPEGRELGAAGRAYINWAANMAVKLDTGVPWVMCKEDDAPDPVINACNGFYCDYFSPNKPYKPTLWTESWSGWFTEFGGPNHQRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYSHLKELHKAIKQCEPALVSSDPTITSLGTYQQAHVFSSGSGACAAFLANHHTKSSARVTFNNNHYDLPPWSISILPDCRNIVFNTANVRVQTSQTQMVPTNSKKFSWETYDEDLSSLDETSGITAAGLLEQINVTRDTSDYLWYITSVDISSSESFLRGGQKPSIIVQSSGHAVHVFVNGQFSGSAFGTREQSSCKFNGPVNLRAGTNKIALLSVAVGLPNVGLHFETWKTGINGPVLLKGLDQGTKDLTWQQWSYQIGLKGEAMNLVSPNGVSSVDWARESLAAQNQQQLKWHKAYFEAPEGDEALALDMGSMGKGQVWINGESIGRYWLAYAKGDCNSCSYSGTFRPDNCQLGCGEPTQRWYHVPRSWLKPTNNLIVIFEELGGNPWKISLFKRTLNTPPAA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2568 793 FunFam Beta-galactosidase 505 642 - -
Mibi08g2568 793 MobiDBLite consensus disorder prediction 1 30 - -
Mibi08g2568 793 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 232 244 IPR019801 GO:0004553|GO:0005975
Mibi08g2568 793 Gene3D - 654 789 - -
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 366 382 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 346 361 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 705 721 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 309 324 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 230 245 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 97 114 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 118 136 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 173 192 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 PRINTS Glycosyl hydrolase family 35 signature 678 692 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 Pfam Beta-sandwich domain in beta galactosidase 406 477 IPR041392 -
Mibi08g2568 793 Pfam Glycosyl hydrolases family 35 94 398 IPR031330 -
Mibi08g2568 793 Gene3D Glycosidases 80 403 - -
Mibi08g2568 793 FunFam Beta-galactosidase 82 402 - -
Mibi08g2568 793 FunFam Beta-galactosidase 650 790 - -
Mibi08g2568 793 PANTHER BETA-GALACTOSIDASE RELATED 78 787 IPR001944 GO:0004553|GO:0005975
Mibi08g2568 793 FunFam Beta-galactosidase 351 479 - -
Mibi08g2568 793 SUPERFAMILY Galactose-binding domain-like 461 632 IPR008979 -
Mibi08g2568 793 SUPERFAMILY Galactose-binding domain-like 641 782 IPR008979 -
Mibi08g2568 793 SUPERFAMILY (Trans)glycosidases 84 403 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2568 Mibi-ChrMibi08 43368064 43373418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2568 66 788 Glycoside Hydrolase AT4G36360 73.481 0.0 1167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2568 08 43368064 43373418 Mibi05g1111 05 13483665 13489081 CCT
Mibi08g2568 08 43368064 43373418 Mibi08g2568 08 43368064 43373418 ECH