Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2566 ATGTTTAAAGGGAGGGTTACGAGTTACAGGTCTACCAACTGGTGGTTAAGGTTTGAACCCTTCCAAGCAAACAACCACCTCCTCTTCCTTCCCTCCACCATCCAATCCCTGAGACGGCTTCTTCTTCTTCTTCTCAAGCTTTCTAGCGACTTTTGTCTTGGCGTTTGTCACACTCTTCCTCTCCTTCCTTTCAGGAAAGTCCAACGAACTGTCGATGCTGACCTCATTATTGTGAAGGGATCGGGAAATCTGCCTCTAATTAATTTGCAATCGCAATCTTTTGCTGCTAATGTGATGATGTACCCGAACCAAGCTTTTTCTTCTGGGTCCTACGCGGAGATGTTGTCTGGGAATTCTCTTTTACCTCATAACTTTACAGAGAACCAAAATGAGGTGAAGTTCATAACGGCCGTTGGTGACACTGTGGCCATGCAATCCATTGATGGGCATTCCAACACTGCAACAGGTGATCCATCCTTCACAAGGACGCCTTTGGGGCTCGTTGACAGTGAACAGAACATACAGAGTCAGGGCTTATCTCTTAGCCTTGGCACGCTCATGCCTGTCCCTCCCTTCCAATACCACTATCCTTCCACCGGCTTTTCGTCACTTATGGCTCCAAATCTTCCTAACTTTAAGGGCACTGTTTCTCTTAAAGATGATGAGGCAAGTGCTGAATGCATGGGACCTGTGTCTTCTGGAGGTTTTAATAACTTCCACAAGGAGGCTTTGTACAATCCACACTCCTCACTCTACCACAAGGATGTCTCCAATGATCCGTCGTGTCTTCATGGGACACAAGGTTTTTCAAACGCTGCTTTAAACTCCCAATACCTTAAAGCAGCACAGGAATTGCTTGATGAAATAGTTAATGTACGAAAGGCCTTGAAGCAACCTGGCCTGGACAAGCAAAAAAGTTCCCGTGACATTGGAATAGATGGCTCCAAAGAGTCCGAGGAAAAGTCTACCAGTCAGTCTTTGCAGAATCAGGACCCCAATGGCAATGCTTCATCTGCCAATGCGTCATGTGAGTTGTCACCCGCAGAACGGCAGAGTTTGTTGGACAAGAAGGCAAAGCTTTTGGCCATGTTAGATGAGGTAGATAAAAGATACAGGCAGTACTGCCATCAGATGCAAATGGTGGTATCATCTTTTGATATGGTTGCTGGTTGTGGGGCGGCTGAGCCATACACTGCACTTGCTTTGCGAACAATTTCTCGCCATTTTCGCTGTTTGCGTGATGCTATTAGTGGCCAAATTCAGGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATACCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTGATGCGACAAGCTTGGAGGCCCCAGAGGGGTCTTCCTGAAAGTTCGGTTTCAATACTCCGTGCTTGGCTTTTTGAGCATTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAACCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCTGAGATGGCAAGCTGCAATCTCTCATCTGAAAGTACTCCCCAAGCTCCAAGAGAAAATAAAGGGGAAGATTCGCAGGACAATTTAAAAGCTGCTAATAATGTTCAACAAGGGCAGCTTCATGAGTTAAAGCTTGACCATAGCTCCGCTTCAGAATTTGATACTGCCCATGGAATTATGAAATTGCAGGGTGATCAAAGGCCTAATATGAACAATGCCCTTTATGCCGGCGGACCTATGCCAACCAACCACAATGGTGATGGCTGCCTAATGCCTTCTGATCCGGCCTCATATGACATAGCGGAGTTTGGTAGTTTTCCGGTGGGTGGCCATGTGTCTCTTGCGTTGGAGTTGCGCAACTGTGAAACTGAGGAATTCGCCTCATCTGATAATGGCTTCAACAAACAACGTAACCAGGCATTAGATCCTTCCACAGAAAATAATTTGATTGATTATCATTTCACAGATTCAGGAAAGCAACAGAACAGGTTCAGTAATCCCCATCTATTGCATGAGTTTGTCGTCTAG 2121 0.463 MFKGRVTSYRSTNWWLRFEPFQANNHLLFLPSTIQSLRRLLLLLLKLSSDFCLGVCHTLPLLPFRKVQRTVDADLIIVKGSGNLPLINLQSQSFAANVMMYPNQAFSSGSYAEMLSGNSLLPHNFTENQNEVKFITAVGDTVAMQSIDGHSNTATGDPSFTRTPLGLVDSEQNIQSQGLSLSLGTLMPVPPFQYHYPSTGFSSLMAPNLPNFKGTVSLKDDEASAECMGPVSSGGFNNFHKEALYNPHSSLYHKDVSNDPSCLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKALKQPGLDKQKSSRDIGIDGSKESEEKSTSQSLQNQDPNGNASSANASCELSPAERQSLLDKKAKLLAMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLSSESTPQAPRENKGEDSQDNLKAANNVQQGQLHELKLDHSSASEFDTAHGIMKLQGDQRPNMNNALYAGGPMPTNHNGDGCLMPSDPASYDIAEFGSFPVGGHVSLALELRNCETEEFASSDNGFNKQRNQALDPSTENNLIDYHFTDSGKQQNRFSNPHLLHEFVV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2566 706 SUPERFAMILY Homeodomain-like 460 526 IPR009057 -
Mibi08g2566 706 SMART prehox3 267 418 IPR006563 -
Mibi08g2566 706 MobiDBLite consensus disorder prediction 532 557 - -
Mibi08g2566 706 Pfam Associated with HOX 274 417 IPR006563 -
Mibi08g2566 706 ProSiteProfiles 'Homeobox' domain profile. 456 519 IPR001356 GO:0003677
Mibi08g2566 706 Gene3D - 456 533 - -
Mibi08g2566 706 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 200 547 - -
Mibi08g2566 706 SMART HOX_1 459 523 IPR001356 GO:0003677
Mibi08g2566 706 MobiDBLite consensus disorder prediction 298 320 - -
Mibi08g2566 706 Pfam Homeobox KN domain 476 515 IPR008422 GO:0003677|GO:0006355
Mibi08g2566 706 MobiDBLite consensus disorder prediction 321 342 - -
Mibi08g2566 706 MobiDBLite consensus disorder prediction 298 342 - -
Mibi08g2566 706 CDD homeodomain 459 520 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2566 Mibi-ChrMibi08 43343968 43348470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2566 129 531 Homeobox Transcription Factor Family AT1G19700 49.881 1.69e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi08g2566 POX 7.7e-51 No_clan