Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2562 ATGTCTCCGGTCGTCAGTGAAGTCCTTCGTTCCGGGTTTATGATAAATTCTTCCCTGAGGCGCAGGACCCACCTAGTTCAATCCTTCTCTGTTGTGTTCCTCTACTGGTTCTATGCTCTGGTGCACATATCATATCGAATGGACTCGCCTGGTGGAAATTCCTCCATGTCCTCCAAACTTCAGAGCTCTGGCTCTGAAGGGGATTTGCAGGCTTTGATGGATCAGAGGAAAAGGAAGAGAATGCAATCGAATCGGGAATCCGCAAAAAGATCCCGCATGCGAAAGCAGAAGCACTTGGATGATCTGATGGGGCAGGTGAATGAGCTGAGAAAGAAAAATGGCGAAATCCTCACCAGCATAAACATCACCACACAGCACTATGTGAAAGTAGAGGCTGAGAACTCTGTTTTGAGGGCTCGAATGGCAGAACTTAGCAATAGGCTTCAATCACTGAACGATATCCTCAGTTACATAAATACCAGCAATGGGGTGTGTGAAACCGATTGCTATTCAATGAGAGCGGATAACTTTTTGAATCCCATGGACACTATCTTTCTGAACCCGCCAATTATGGCTTCTGCAGACTTTTTTCAGTGGTGA 600 0.4617 MSPVVSEVLRSGFMINSSLRRRTHLVQSFSVVFLYWFYALVHISYRMDSPGGNSSMSSKLQSSGSEGDLQALMDQRKRKRMQSNRESAKRSRMRKQKHLDDLMGQVNELRKKNGEILTSINITTQHYVKVEAENSVLRARMAELSNRLQSLNDILSYINTSNGVCETDCYSMRADNFLNPMDTIFLNPPIMASADFFQW 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2562 199 PANTHER BZIP TRANSCRIPTION FACTOR 44 57 194 - -
Mibi08g2562 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Mibi08g2562 199 Pfam bZIP transcription factor 76 131 IPR004827 GO:0003700|GO:0006355
Mibi08g2562 199 Gene3D - 74 127 - -
Mibi08g2562 199 Coils Coil 92 112 - -
Mibi08g2562 199 CDD bZIP_plant_GBF1 77 127 IPR045314 GO:0003700|GO:0006355
Mibi08g2562 199 FunFam BZIP transcription factor 74 125 - -
Mibi08g2562 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Mibi08g2562 199 SUPERFAMILY Leucine zipper domain 76 129 IPR046347 GO:0003700|GO:0006355
Mibi08g2562 199 Coils Coil 127 154 - -
Mibi08g2562 199 MobiDBLite consensus disorder prediction 74 97 - -
Mibi08g2562 199 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2562 Mibi-ChrMibi08 43320525 43321314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2562 70 199 bZIP Transcription Factor Family AT4G34590 54.676 8.64e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi08g2562 bZIP_1 1e-09 CL0018