Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2561 ATGGAGGTGTTCTCGCTGTCGACGAACTCGGCATGTCTGTTCATGAATAAGGGAATGGCGACTCCTGTTGAGCCTCCAAATGGGATCAGAAATGAAGGAAAGCATTATTACTCCATGTGGCAAACCCTGTTTGAGATTGATACTAAATATGTGCCTATTAAGCCTATTGGTCGAGGAGCATATGGGATTGTATGCTCTTCAGTCAACCGAGAAACCAATGAAAAAGTTGCCATTAAGAAGATACAGAATGCTTTTGAAAACCGGGTTGATGCACTAAGAACTTTGCGTGAATTGAAACTTCTTCGGCATCTCCATCATGAGAATGTGATTGCTTTGAAAGATATCATGATGCCCAATCATCGAAGAAGTTTCAAGGATGTCTACCTGGTTTATGAACTTATGGACACCGATTTGCATCAGATTATTAAGTCTTCGCAGGCACTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTAGGGGCTTGAAGTATCTCCATTCAGCTAACATCCTCCATCGTGACTTGAAGCCTGGGAATCTACTAATCAATGCAAACTGTGACCTAAAAATATGTGATTTCGGGTTAGCACGCACTGGCAGCACCAAGAACCAATTTATGACTGAGTATGTTGTCACACGGTGGTATCGAGCACCAGAACTTCTGCTTTGCTGTGACAATTATGGAACATCTATTGATGTCTGGTCTGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGTCTGAATCAGCTGAAGCTAATTATAAACATTCTTGGCAGTCAAAGGGAGGAGGATATAGAATTCATTGATAATCCTAAGGCAAAGAGGTACATCAAATCACTTCCTTATTCTCCAGGAATGCCATTTTCCCGGCTTTACCCAAATGCCCATCCACTGGCGATTGATCTACTGCAGAAGATGCTTGTTTTCGACCCATCGAAGAGGATTAGTGTTACTGAAGCACTTCAACACCCTTATATGTCTCCTTTATACGATCCTAAGAGTGACCCTCCAGCCGTTGTTCCTATTGATCTTGACATGGAGGAAGAGTTGGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTTACTACCATCCTGAAGCTGCTACAGAAAATACAATGGTTTGTTCGTGA 1173 0.4246 MEVFSLSTNSACLFMNKGMATPVEPPNGIRNEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPNHRRSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTGSTKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKRYIKSLPYSPGMPFSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPKSDPPAVVPIDLDMEEELGEEMIREMMWKEMLYYHPEAATENTMVCS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2561 390 Gene3D Phosphorylase Kinase; domain 1 37 373 - -
Mibi08g2561 390 Pfam Protein kinase domain 51 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2561 390 ProSitePatterns MAP kinase signature. 85 188 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi08g2561 390 FunFam Mitogen-activated protein kinase 134 363 - -
Mibi08g2561 390 CDD STKc_TEY_MAPK 44 379 - -
Mibi08g2561 390 Gene3D Transferase(Phosphotransferase) domain 1 134 363 - -
Mibi08g2561 390 SUPERFAMILY Protein kinase-like (PK-like) 42 343 IPR011009 -
Mibi08g2561 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Mibi08g2561 390 ProSiteProfiles Protein kinase domain profile. 50 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2561 390 FunFam Mitogen-activated protein kinase 36 144 - -
Mibi08g2561 390 SMART serkin_6 50 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2561 390 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Mibi08g2561 390 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 49 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2561 Mibi-ChrMibi08 43306125 43309965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2561 19 386 MAP Kinase Gene Family AT1G10210 87.228 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi08g2561 Pkinase 4.7e-72 CL0016