Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2549 ATGGGTTGGACCAGAGAAGAGAACAGAAGATTTGAGGATGCACTTGCAGTGTATGGGCCGGAAGATCCAAACAGGTGGCAGCATGTGGCAAACATGGTGGCCGGGAAATCTGCACAAGAAGTGAAAATGCACTATGAGATCCTCATGGAGGACGTCAATCGAATTGAGCGTGATCAAGTCCCTTTGCCCAGATATGTTCACTCCAGGCTTACTGCCCAAGACCCCTGCAGAATGATAAGAAATCTAAATCTTCGTTGA 258 0.4767 MGWTREENRRFEDALAVYGPEDPNRWQHVANMVAGKSAQEVKMHYEILMEDVNRIERDQVPLPRYVHSRLTAQDPCRMIRNLNLR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2549 85 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Mibi08g2549 85 SMART sant 3 51 IPR001005 -
Mibi08g2549 85 CDD SANT 3 45 IPR001005 -
Mibi08g2549 85 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Mibi08g2549 85 Gene3D - 1 62 - -
Mibi08g2549 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 73 IPR044636 GO:0003700
Mibi08g2549 85 FunFam Transcription factor SRM1 1 62 - -
Mibi08g2549 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Mibi08g2549 85 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Mibi08g2549 85 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2549 Mibi-ChrMibi08 43160108 43161145 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi08g2549 Myb_DNA-binding 3.2e-07 CL0123