Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2542 ATGAGTGACTCTGATGAAGCAAGAGATCTCAGGAAACCATTCCTCCACACGGGAAGCTGGTATAAAATGAGTTCGCGGCAGTCCAGTTTGTTGAGTTCTTCTCAGGCCATTCGCGACAGGGCCATATCCGTCGTCGCCTGCGTTCTCATCGTTGCTTTGGGTCCTATTCAGTTTGGTTTTACGGCGGGTTATACATCCCCCACCCAATCTGCTATGATCGAAGATCTCAAGCTTTCAGTCTCTGAGTTTTCTTTGTTTGGTTCTTTATCCAATGTAGGTGCCATGGTCGGAGCAATAGCTAGTGGCCAGATTGCTGAGTACATAGGGCGAAAAGGGGCTTTAATGATTGCTTCGGTTCCTAATATTATTGGTTGGCTAGTAATCTCATTTGCAAAAGATTCTTCTTTTCTCTATCTGGGAAGGCTGTTGGAGGGATTCGGCGTCGGAGTAATATCTTATACGGTACCAGTATACATAGCTGAAATATCACCTCAAAACTTGAGGGGAGGTCTGGTTTCAGTCAACCAGCTCTCTGTCACCATTGGAATCATGCTGGCTTATTTGTTGGGGCTCTTTGTTGAATGGAGAATACTCGCAGTACTAGGAATTCTGCCGTGCACAATATTAATACCTGGTTTGTTTTTCGTTCCTGAATCTCCTAGATGGCTGGCAAAAATGGGCATGACAGAAGAATTTGAGACTTCTTTGCAAGTGCTCCGGGGTTTTGATACTGACATCTCTGTTGAAGTTAGTGAAATTAAGAGGGCTGTTGCATCTGCTGGCAGAAGAACTACAATTCGATTTGCAGAACTCAAACAAAGAAGATATTGGCTTCCGTTAATGATTGGAAATGGAGTTCTCATTCTGCAACAGCTTTCCGGAATTAATGGTGTTCTGTTCTATTCCAGCACCATCTTTGAAAGCGCTGGGATTAGTTCAAGTAATGTAGCCACATGTGGACTTGGTGCTGTTCAGGTTCTCGCCACCTGTATAACTTTGTGGTTAGCTGACAAGTCTGGTCGCAGGTTGCTTCTTATTGTCTCTTCTACTGGAATGGCCATTAGTCTCACAGTTGTTGCTGTCTCATTCTATATAAAGGATTTCATATCAGATGAGTCTTCTTTATACAAGATATTGGGCATCATAGCAGTGGCCGGAGTTGTGGCTATGGTTGCTGCTTTCTCTGTGGGAATGGGAGCCATTCCGTGGATTATAATGTCTGAGATTCTTCCCCTCAACATTAAAGGCCTTGCCGGAAGTGTTGCTACCCTTGCTAATTGGTTCTTTGCCTGGTTGGTTACATTGACGGCAAATTGGCTTTTGGACTGGAGCACTGGAGGAACTTTCACCATATATGCGGTTGTATGTGCTTTGGCTTTGATATTTATCACCATTTGGGTCCCTGAGACAAAAGGGAAAACCCTTGAAGAAATTCAATGGGCTTTCAGATGA 1452 0.4408 MSDSDEARDLRKPFLHTGSWYKMSSRQSSLLSSSQAIRDRAISVVACVLIVALGPIQFGFTAGYTSPTQSAMIEDLKLSVSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGALMIASVPNIIGWLVISFAKDSSFLYLGRLLEGFGVGVISYTVPVYIAEISPQNLRGGLVSVNQLSVTIGIMLAYLLGLFVEWRILAVLGILPCTILIPGLFFVPESPRWLAKMGMTEEFETSLQVLRGFDTDISVEVSEIKRAVASAGRRTTIRFAELKQRRYWLPLMIGNGVLILQQLSGINGVLFYSSTIFESAGISSSNVATCGLGAVQVLATCITLWLADKSGRRLLLIVSSTGMAISLTVVAVSFYIKDFISDESSLYKILGIIAVAGVVAMVAAFSVGMGAIPWIIMSEILPLNIKGLAGSVATLANWFFAWLVTLTANWLLDWSTGGTFTIYAVVCALALIFITIWVPETKGKTLEEIQWAFR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2542 483 CDD MFS_GLUT6_8_Class3_like 47 477 IPR044775 GO:0008643|GO:0051119
Mibi08g2542 483 PANTHER - 35 479 - -
Mibi08g2542 483 Pfam Sugar (and other) transporter 48 482 IPR005828 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 SUPERFAMILY MFS general substrate transporter 48 479 IPR036259 -
Mibi08g2542 483 Gene3D MFS general substrate transporter like domains 38 483 IPR036259 -
Mibi08g2542 483 ProSiteProfiles Major facilitator superfamily (MFS) profile. 47 471 IPR020846 GO:0022857
Mibi08g2542 483 ProSitePatterns Sugar transport proteins signature 2. 143 168 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 FunFam sugar transporter ERD6-like 6 38 482 - -
Mibi08g2542 483 TIGRFAM SP: MFS transporter, sugar porter (SP) family 33 478 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 ProSitePatterns Sugar transport proteins signature 1. 101 118 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 PRINTS Sugar transporter signature 138 157 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 PRINTS Sugar transporter signature 290 300 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 PRINTS Sugar transporter signature 55 65 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 PRINTS Sugar transporter signature 384 405 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi08g2542 483 PRINTS Sugar transporter signature 407 419 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2542 Mibi-ChrMibi08 43135671 43140654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2542 2 483 Organic Solute Cotransporters AT1G75220 75.983 0.0 759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2542 08 43135671 43140654 Mibi08g2542 08 43135671 43140654 ECH