Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2540 ATGGGATTACTACAGAGAGTACTATTAAAGACAGCTTTGGTTTTGCTCTTTATTCAGTTTGGTTTGTCTGGAGAAATATCTTCGAGCTTCAGAAACGAAAGGCTCGCGTTGCGTCTGCTTCGTTCGTCTTTGGGGATTCGTAGCAAGTACTGGCCCATAAAAGCCGAACCGTGCAGGAACTGGACCGGGGTTCGGTGCAAGAACGGCCGAGTCGTTGGGATAAACCTATACGGTTTAAGACGAACCCGATTAGGTCGTCTTCATCCTAGTTTCGCAGTGGATTCTCTTGCCAATCTCACACGCTTACAGTCATTCGAAGCTTCTGGATTCTTGCTCAATGGCTCTATTCCTGACTGGTTCGGACAACGCCTGAAATCACTTCAAAGGCTCGACCTGAGTTCTTGCTCACTCACGGGTCTCATTCCTCCATCTCTTGGTGATTTGAGCGAGCTGAAGTTTCTGATTCTTGCGGATAATAGTCTTACTGGTAGAATGTCTTCCACATTGGGACAATTATCCAGTTTATCGGTTTTGAATCTATCAGGAAATTCGCTCACTGGATTATTGCCCAACTCTTTCTCTTCTCTGGTCAATCTCACAACCCTTGATCTTTCTTCTAATTTCTTCTCTGGTCCCATTCCATCCTATATTGGTGACCTTAAGAGGCTTAAGTTTTTGAATCTTTCCGACAATGGCTTCACTGCCTCATTGCCTTACCAACTGAGTAATCTTTCTCAGTTACTTCAGCTTAATCTAAGCAAGAATTCTTTGTCTGGACAACTGCCAGGTGATTTGTTTTCTAATCTTATTTCCCTACAAAGTCTATCTCTGAGTAGGAATGCTTTTGAGGGCGTTCTTCCTCCTGCATTGTGGTCAATGAGCCACTTGTCCTTCCTTGATGTATCCACGAACAACCTCACTGGCACCCTGCCTAAACTTGGCTCAAATGTCAATTCTACCGGTGTTGTCTTCAACCTCTCAAATAATTTATTCTATGGATTTCTTAATACTTCGTTTAAAAAATTTAGGACAATTGATTTGTCTAGTAATTATTTCCAAGGCAACGTGCCTGATCATGGCTCCAGTAATATTACTCTTGATACAAATTGCCTCATGGAGAGGCCAAATCAAAGGAGTTCCGGCGATTGCAGACTGTTTTATGCTCGGAGAGACCTAATCTTTATTGGTGCTCAAGAACCAGCTGAGTCGCCTTTGGCCGAAGCAGAGTCCAGAAACAACAAACGAGTGATATTCATTTTGGCAGGCACATTTGGTGGCTTTGTGTTTATTGTGATTCTAGCATTAGTCTTAGTGCTTCTTCTAGGAAAATGTGGTAACATCACTGAAACTCAAAAAAGGGCAGCACATGAGGAACCTGTTCAAGAAGGGGAAGGTCCTGTGCCTCCTAAAAATCCCATGTTAGACAGCGGCATGGGAGAATCATTTAGTTATGAGCAAGTACTCCATTTGACTGGTAATTTTGCAGACGTTAATATCATCAAGCATGGTCATTCCGGGGACCTTTTCAGGGGAATCCTAGAAGGTGAAGTAAGTGTGGTTGTGAAAAGGGTAGCTTTGAACTTAGTCAAGAGAGAATCATTCATGTCCGAATTGGAACTGCTGAGTAAGGCTTCCCATACAAGGTTGGTGCCCTTATTAGGGCTCTGCTTGGAGAAAGAGAATGAGAAATTTTTAGTTTACAAGTACATGCCAAATAGAGATTTGGCTGCTTGCTTGCACAGAGTGAGTGGCTCAAACGATAAAGAACAATCCCTGGATTGGATCACCAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCTTATATTACCTGCATGATTGTAGCCCTCCCCTTGTCCATAGAGATGTCCAAGCAAGCAGTATACTTCTTGACGATAAATTTGAAGTTAGATTTGGAAGTTTGAGCGATGTGACTGCCCAAGGAGATATTCACCAAAGTGTCATCGCAAGGTTATTTCGCAAGTCACAATCTTTTGATCAAAACAATCCTGGTTCATCATCTGCAACCTGTGCTTATGATGTATACTGTTTTGGGAAGGTTCTACTTGAGCTTGTTACCGGTAAGCTTGGTATTAGTAACACAGATGATGCCAGCACAATGGAGTGGATAGAGCAAACGTTGTCATACATAAGCATATACGACAAGGAACAGGTGACTAAAATAGTTGACCCATCTCTTATAGTGGATGAGGACCTATTGGAAGAGGTGTGGGCTATGGCAATTGTGGCCAGATCATGCCTCAACCCTAAGCCTTTTAAACGCCCTCCAATAGGGCATGTCCTAAAAGCACTGGAAAATCCATTGAAGATAGTGAGAGAAGAATATAATAGCAGCTCAGCTAGGTTGAGAACAACTTCATCAAGGAGATCTTGGAGCACGGCTTTCTTTGGCAGCTGGAGGCAGAGCTCATCAGAGAGTGCTGCTGCAACTGCAAGTAGAGAGGTTATTACTGCCAGTGGCTTTAAACAAACGGGAAGAATAGGGTCTCAGGGTAGTGGCGGAAATGATCACTCTTCTTCCAACAAGAGGTTGTCCAGTGAAGTTTTCCCTGAACCTTTGGAAATTCAGGAGGTGCAAACTGGAGACTCAAGATGA 2616 0.4323 MGLLQRVLLKTALVLLFIQFGLSGEISSSFRNERLALRLLRSSLGIRSKYWPIKAEPCRNWTGVRCKNGRVVGINLYGLRRTRLGRLHPSFAVDSLANLTRLQSFEASGFLLNGSIPDWFGQRLKSLQRLDLSSCSLTGLIPPSLGDLSELKFLILADNSLTGRMSSTLGQLSSLSVLNLSGNSLTGLLPNSFSSLVNLTTLDLSSNFFSGPIPSYIGDLKRLKFLNLSDNGFTASLPYQLSNLSQLLQLNLSKNSLSGQLPGDLFSNLISLQSLSLSRNAFEGVLPPALWSMSHLSFLDVSTNNLTGTLPKLGSNVNSTGVVFNLSNNLFYGFLNTSFKKFRTIDLSSNYFQGNVPDHGSSNITLDTNCLMERPNQRSSGDCRLFYARRDLIFIGAQEPAESPLAEAESRNNKRVIFILAGTFGGFVFIVILALVLVLLLGKCGNITETQKRAAHEEPVQEGEGPVPPKNPMLDSGMGESFSYEQVLHLTGNFADVNIIKHGHSGDLFRGILEGEVSVVVKRVALNLVKRESFMSELELLSKASHTRLVPLLGLCLEKENEKFLVYKYMPNRDLAACLHRVSGSNDKEQSLDWITRLKIAIGAAEGLYYLHDCSPPLVHRDVQASSILLDDKFEVRFGSLSDVTAQGDIHQSVIARLFRKSQSFDQNNPGSSSATCAYDVYCFGKVLLELVTGKLGISNTDDASTMEWIEQTLSYISIYDKEQVTKIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPIGHVLKALENPLKIVREEYNSSSARLRTTSSRRSWSTAFFGSWRQSSSESAAATASREVITASGFKQTGRIGSQGSGGNDHSSSNKRLSSEVFPEPLEIQEVQTGDSR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2540 871 Pfam Protein tyrosine and serine/threonine kinase 500 713 IPR001245 GO:0004672|GO:0006468
Mibi08g2540 871 FunFam Predicted protein 468 569 - -
Mibi08g2540 871 SUPERFAMILY L domain-like 52 360 - -
Mibi08g2540 871 Gene3D Phosphorylase Kinase; domain 1 470 569 - -
Mibi08g2540 871 Pfam Leucine Rich Repeat 126 146 IPR001611 GO:0005515
Mibi08g2540 871 Gene3D Transferase(Phosphotransferase) domain 1 570 794 - -
Mibi08g2540 871 FunFam Putative LRR receptor-like serine/threonine-protein kinase 570 792 - -
Mibi08g2540 871 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 198 769 - -
Mibi08g2540 871 MobiDBLite consensus disorder prediction 826 853 - -
Mibi08g2540 871 ProSiteProfiles cAMP/cGMP binding motif profile. 499 548 IPR000595 -
Mibi08g2540 871 Gene3D Ribonuclease Inhibitor 186 374 IPR032675 -
Mibi08g2540 871 Pfam Leucine rich repeat 151 207 IPR001611 GO:0005515
Mibi08g2540 871 Pfam Leucine rich repeat 261 306 IPR001611 GO:0005515
Mibi08g2540 871 SUPERFAMILY Protein kinase-like (PK-like) 470 771 IPR011009 -
Mibi08g2540 871 MobiDBLite consensus disorder prediction 826 871 - -
Mibi08g2540 871 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Mibi08g2540 871 ProSiteProfiles Protein kinase domain profile. 494 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2540 871 SMART LRR_typ_2 244 268 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 196 220 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 172 195 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 148 171 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 124 147 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 293 316 IPR003591 -
Mibi08g2540 871 SMART LRR_typ_2 269 292 IPR003591 -
Mibi08g2540 871 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 166 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2540 Mibi-ChrMibi08 43101472 43105144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2540 24 663 Miscellaneous Gene Families AT2G16250 47.917 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mibi08g2540 PK_Tyr_Ser-Thr 7.8e-22 CL0016