Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2504 ATGTTTTGTATGTACCAGAAGCGAAGAGAGCAACCTCAGCCTCCTTGTCTAACAGACGTGGAGTCAGATAGATTAAGTTGCTTACCGGGTCATGTTATAGACCACATTTTGTCACATTTGTCAATTAGGGAAGCAGTGAGGACAAGTGTTTTATCCAGCAAATGGAGGTACAAATGGTCTACTCTACCAAATCTTGTGTTCGATAACCAGTGTTTCCCCGTTTCTTCCCAAGATCATTCAGTTATCAAGAACAAGCTTGTGAGAATTATTGATCATGTACTTTTGCTTCACTCTGGTGCAATAAACAAGTTCAAGCTCTCCCATCGTGATCTAATTGGTGTGACTGACATTGATCGTTGGACTCTTCATCTAACCAGAAGGTCTATCAAAGAGCTTGTGCTGGAAATCTGGAAGGGGCATCGCTACAAGATACCCTCTTGTCTATTTACTTGCCAAAGTTTAACTCATTTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACATTTACAGGCTTCAGGAACTTGAAGAGTCTTGATCTACAGCATGTTACTATGGATCAAGATGTGTTTGAAAAATTGATATCTAACTGCCCACTGCTTGAACGTCTAACATTAATGAACTTTGATGGCTTCACTCATCTCAACATTGATTCACCGAATCTTCAGTTTTTTGACATTGGAGGCAAATTTGAGGATGTTAGATTTGAGAACACTTTCCATTTAGCTGTTGTATCCATTGGTTTATATTTGAACCTTGAAAATGAGAAAAATAGATGGCAAGGAAGTTCTAGCAATTTGCTCAAGTTCTTTGTTCATCTACCTCATGTTAGAAGGTTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGAGTTGTGCCACTAAAGCTTCCTAGACCATGCATTGATTTAGCTTATCTTTCCATACGCATCAATTTCAATGATTCCAAGGAAATTTCGGCTGCTTTGTGCCTCTTGAGGAGTTCTCCGAATCTTCAAGAACTGGAAGTGTTGGCACGCACTGAGGAGCAACATACTGCTGTGGGAACACAGGCATACTGTTGGGAGGATGAGTATTGGAATTGCCCGGTGATGCAACTGCAGTTTGTTAGGATAGACGGTATCTCTGGTATCAAACCCGAACTAGATTTTATCGGCTTTCTGCTTTTATATTCTCCCATTCTAGAACGGATGACTGTGAAACCTGCTTCTTCAAATGGAGGAACAGAGTTAATGAAAGAGTTATTGCGGTTCAGGAGAGCATCAGGACAAGCTGAAATTATATACCTGGATCCTTGA 1305 0.4023 MFCMYQKRREQPQPPCLTDVESDRLSCLPGHVIDHILSHLSIREAVRTSVLSSKWRYKWSTLPNLVFDNQCFPVSSQDHSVIKNKLVRIIDHVLLLHSGAINKFKLSHRDLIGVTDIDRWTLHLTRRSIKELVLEIWKGHRYKIPSCLFTCQSLTHLELFNCWLKPPSTFTGFRNLKSLDLQHVTMDQDVFEKLISNCPLLERLTLMNFDGFTHLNIDSPNLQFFDIGGKFEDVRFENTFHLAVVSIGLYLNLENEKNRWQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPLKLPRPCIDLAYLSIRINFNDSKEISAALCLLRSSPNLQELEVLARTEEQHTAVGTQAYCWEDEYWNCPVMQLQFVRIDGISGIKPELDFIGFLLLYSPILERMTVKPASSNGGTELMKELLRFRRASGQAEIIYLDP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2504 434 SMART 9598neu4hmm 363 432 IPR006566 -
Mibi08g2504 434 Pfam F-box domain 25 58 IPR001810 GO:0005515
Mibi08g2504 434 Pfam Leucine Rich Repeat 175 199 IPR013101 -
Mibi08g2504 434 PANTHER F-BOX PROTEIN-LIKE 23 406 - -
Mibi08g2504 434 SUPERFAMILY F-box domain 23 75 IPR036047 GO:0005515
Mibi08g2504 434 ProSiteProfiles F-box domain profile. 22 70 IPR001810 GO:0005515
Mibi08g2504 434 SUPERFAMILY RNI-like 122 338 - -
Mibi08g2504 434 Gene3D Ribonuclease Inhibitor 84 376 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2504 20 242 EF-hand Containing Proteins AT5G41840 26.122 2.82e-14 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2504 08 42761385 42763287 Mibi08g2504 08 42761385 42763287 ECH