Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2498 ATGATCATAAAACCCCCCCTTCCGATCATCCTACTACTCGTGTCTCTCCTCCCCTTCATCGCCGGCCAATCGCACCGCCGTCCGTACTGCCGGAAAACATGCCCTCCCCAACAAAAGTCCCTCCTCCTCCAAAGCCTGCCTCACGCCTTTGGCTTCTCCTCCGCCTGCGCCATCCCACTCAACTGCACCCCCTCCGGCACAGTCCTCATCGGAGATTACCCCGTCCACTCCATTAACTCCGACACCATAATCCTCGCCGTCAGATCCCAATGTAACCGTCCCTTCCACACCTTCCATCGTCTCTTCACCCGCAGTTACGCTCCCACATCGCGAAACGCCATACTTTTGCAGAATTGCAGCGAAACTGTCTCCCCCTGTGTTATCCCAGCAACCATGGTTCAGACTCAATTCGAATCCAAAAATTGCAGCTCCGGTGGCGGCAATTTGAGCTGCTACTATGAAAATTCCACCGTTGATTTCATGAGTCTCCAGAAATTGACAAACAAACGGTGCCGTTACATTATGTCTTCGATTGCGGCGGAGGAATTGAGGAACAATTCGGATATGAGTGGGGTGTCGTTGGAGGTTGAGACCATTGAGCTGGCCTGGTGGCTGGAAGGAGAGTGTCGGTGTTCGAAACATGCGAACTGTACGAGGTTGAGATCTCCCACTGATCAGAAGCCAGGGTATCGCTGCCGTTGCCGGGAAGGATTCACCGGCGACGGATATTTGGCCGGAACTGCTTGCCGGAAAGCCTCTTCATCCTGCAACCCAGCAAAGTACATGTCTGGTCAATGCGGAGGGACAACCAGATTTGTCGTCTTAATTGGAGGGATGATCTTTGGAGCCTCATTAATGATCGGTGTGGGTCTAATATGTTGTTTCTTTCGGAGACGATCCAAATTAAAAGTCACAAAGAGCACAAAAAGGCGCTTGAATGAAGCTACCAGCAATTACAGCGTCCCTATTTATACCTACAAAGACATCGAGAGAGCCACGAATAACTTCTCAGAGAAACAGAGGCTTGGAACTGGCGCATACGGCACTGTTTACGGAGGAAAACTCGTCAACAACAATGATGAATGGGTTGCCATTAAAAGGATCAAGTACAGAGACACTGATAGTATCGAGAAAGTAATGAACGAGATCAAGCTAATTTCCTCTGTGAGCCATCCCAATCTAGTCCGCTTATTGGGCTGCTCCCTCGAATATGGAGAACAAATCCTTGTCTACGAGTTCATGCCCAATGGAACGTTAAACCAACATCTTTTGAGGGAGAGAGGAATGGGACTTGCATGGCCTGTTCGACTCACTATTGCTACAGAAACAGCACAAGCCATAGCACATCTCCACTCTGCCATAAATCCCCCCATTTACCACAGAGACATCAAGTCAAGCAACATACTTTTGGACAACAATTTTAGATCCAAGGTTGCAGATTTTGGTCTTTCAAGACCTGGGATGACCGAAATATCTCACATTTCAACTGCCCCTCAAGGAACGCCTGGCTATGTTGATCCACAATACCATCAAGATTTTCACCTTTCTGATAAAAGTGACGTGTATAGCTTTGGGGTTGTTCTTGTTGAGATCATAACAGGGTTGAAAGTGGTGGATTTTACTCGTCCCCAGAATGCAGTGAATTTGGCTTCTTTTGCTACAGACAGGATTGGGAAGGGGCTTTTGGATGAGATCATAGATCCATTCCTCGAAGCCCATACGGATGATTGGACACATTTCTCCGTACACAAGGCAGCTGAGCTGGCATTTCGATGCCTTGCATTCCACAGGGACATGAGGCCTTCCATGACAGAAGTTGCCGCTGAGCTAGAACAGATCAGAATGAGTAGATGGACAACCTTTGAAGACAGCAATCGTATGGCCTCAACAGAGTTGTCCTCTTCTTCTCCTTCCTCGGATGAAAGTGAGAAGCCTCTGAGTGTGAGAGAGAAGAAGGTGCAAACGGAGGGAAAAGGCCTTATCAAGTTGCACACCGAGCCTGCGGCGTTAAACTCAGTTGAAAAGCCCAGGGACTGTTCTCCCGTCTCAGTGCAAGATCCAAACTTTTGGCTGAGTGAACAAAGCTCTCTTTCATCAAAATCAAACAGTTTGTTGAGTAAATCATTCGAGAGCTAG 2136 0.4827 MIIKPPLPIILLLVSLLPFIAGQSHRRPYCRKTCPPQQKSLLLQSLPHAFGFSSACAIPLNCTPSGTVLIGDYPVHSINSDTIILAVRSQCNRPFHTFHRLFTRSYAPTSRNAILLQNCSETVSPCVIPATMVQTQFESKNCSSGGGNLSCYYENSTVDFMSLQKLTNKRCRYIMSSIAAEELRNNSDMSGVSLEVETIELAWWLEGECRCSKHANCTRLRSPTDQKPGYRCRCREGFTGDGYLAGTACRKASSSCNPAKYMSGQCGGTTRFVVLIGGMIFGASLMIGVGLICCFFRRRSKLKVTKSTKRRLNEATSNYSVPIYTYKDIERATNNFSEKQRLGTGAYGTVYGGKLVNNNDEWVAIKRIKYRDTDSIEKVMNEIKLISSVSHPNLVRLLGCSLEYGEQILVYEFMPNGTLNQHLLRERGMGLAWPVRLTIATETAQAIAHLHSAINPPIYHRDIKSSNILLDNNFRSKVADFGLSRPGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPQNAVNLASFATDRIGKGLLDEIIDPFLEAHTDDWTHFSVHKAAELAFRCLAFHRDMRPSMTEVAAELEQIRMSRWTTFEDSNRMASTELSSSSPSSDESEKPLSVREKKVQTEGKGLIKLHTEPAALNSVEKPRDCSPVSVQDPNFWLSEQSSLSSKSNSLLSKSFES 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2498 711 Gene3D Transferase(Phosphotransferase) domain 1 414 635 - -
Mibi08g2498 711 FunFam Wall-associated receptor kinase-like 14 isoform A 209 244 - -
Mibi08g2498 711 Gene3D Phosphorylase Kinase; domain 1 297 413 - -
Mibi08g2498 711 SMART serkin_6 336 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2498 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mibi08g2498 711 FunFam Wall-associated receptor kinase-like 14 303 413 - -
Mibi08g2498 711 Gene3D Laminin 209 249 - -
Mibi08g2498 711 MobiDBLite consensus disorder prediction 625 685 - -
Mibi08g2498 711 MobiDBLite consensus disorder prediction 625 642 - -
Mibi08g2498 711 SUPERFAMILY Protein kinase-like (PK-like) 312 611 IPR011009 -
Mibi08g2498 711 Pfam Protein kinase domain 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2498 711 ProSiteProfiles Protein kinase domain profile. 336 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2498 711 MobiDBLite consensus disorder prediction 643 659 - -
Mibi08g2498 711 FunFam Wall-associated receptor kinase-like 20 414 623 - -
Mibi08g2498 711 ProSitePatterns Protein kinases ATP-binding region signature. 342 366 IPR017441 GO:0005524
Mibi08g2498 711 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 57 645 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2498 Mibi-ChrMibi08 42712239 42715808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2498 1 705 Receptor kinase-like Gene Family AT2G23450 49.650 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi08g2498 Pkinase 1.3e-41 CL0016