Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2491 ATGTTCACTACATCGCATCCAGTAATTAGAAGCTTGACATGTTTGCCAGACCTGTCCTTAAACATAAGCCCACCATGTGTTTCAGAATGGGAAGCCAAAGAGGTTACATGCAAAAAAACACTTTACAATGATATATGCTCAACTTCTGATTCTGGTAGCAGTACTGGGAGTGAGTTAAGCCATGAGAATAGCTTTCTTCATCACCACCACCTTGGGCATCCTGAGCCGCCCACGTTGAGGTTGGGCTTAGAAACCCCAGATTTGAATCCCTGTCTCTTACAGGCACTCTCAAGAAACTCTAATCAACATCACTTCCACAATAACCATCAACCCCACATTTATGCCAGAAGCTTTAAGCGAAGTGCAAGAGTCGTTAATGGTGGGAAAAGAAGCGTTAGAGCTCCTAGAATGAGATGGACCACTACTCTCCACGCCCAGTTTGTTCGTGCTGTTCAGCTCCTTGGCGGTCATGAAAGGGCTACTCCAAAGTCGGTATTAGAGCTAATGAATGTTAAGGATCTCACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACCGACAAAGGGACAGGTAATGGGCAGACAGATATGGGTTTGATGAGCCGAAGGCCGGAGAACGATGTGGATGTGCATGGAGCTTCAGCCTGTGAGAGAGCTCGTTTATCACCTCAATCCCTCAGAGCATCATGGCAATCGTCAATGGAGACAAATACAAATGACAGTAGACAAAAGCCCCAAAGAGATGATATGACTCATTCTCATGATCTCAAGGCAAAGGAAACAAAGGTGGATGGAGCTAATAGAGGGCCGTGGGATTGCGTGAAGGAGAGGTTGGATTGTAGCAATATGTCACGTTCGGGTTTGATGCTTGACCTAGAATTCACACTTGGAAGACCCAGTTGGCAAATAGACTGTTAG 936 0.4583 MFTTSHPVIRSLTCLPDLSLNISPPCVSEWEAKEVTCKKTLYNDICSTSDSGSSTGSELSHENSFLHHHHLGHPEPPTLRLGLETPDLNPCLLQALSRNSNQHHFHNNHQPHIYARSFKRSARVVNGGKRSVRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGNGQTDMGLMSRRPENDVDVHGASACERARLSPQSLRASWQSSMETNTNDSRQKPQRDDMTHSHDLKAKETKVDGANRGPWDCVKERLDCSNMSRSGLMLDLEFTLGRPSWQIDC 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2491 311 MobiDBLite consensus disorder prediction 189 274 - -
Mibi08g2491 311 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 310 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mibi08g2491 311 Gene3D - 134 191 - -
Mibi08g2491 311 MobiDBLite consensus disorder prediction 230 246 - -
Mibi08g2491 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 188 IPR006447 GO:0003677
Mibi08g2491 311 SUPERFAMILY Homeodomain-like 132 189 IPR009057 -
Mibi08g2491 311 MobiDBLite consensus disorder prediction 189 205 - -
Mibi08g2491 311 FunFam Myb family transcription factor 133 191 - -
Mibi08g2491 311 Pfam Myb-like DNA-binding domain 136 187 IPR001005 -
Mibi08g2491 311 MobiDBLite consensus disorder prediction 247 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2491 Mibi-ChrMibi08 42670086 42672184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2491 1 213 G2-like Transcription Factor Family AT5G42630 49.541 4.16e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi08g2491 Myb_DNA-binding 1.8e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2491 08 42670086 42672184 Mibi05g1047 05 12835311 12838001 CCT
Mibi08g2491 08 42670086 42672184 Mibi08g2491 08 42670086 42672184 ECH