Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2489 ATGGGAGAAAATTGTCAAAGTTGCAGATCATGGGTAGACGACATTTACTGGTCCCGTTTCCAATTTGTCCATTTTGCCCACTATCTTCCCAACGGATTTGATCGCCAGCTTGCACTGCCCAAAAGTTTTTCAGACAATTTGAGAAAGAAATTGCCAGATAATGTAACTCTGAAAGGTCCTGGTGGCGATGTGTGGAGTGTTGGATTGACAGCCAGAAATGATACCTTGCACTTTACGCATGGCTGGGAACAATTTGTTAAAGATCATTGTTTGGAAGAGAATGATCTGTTGATCTTCAAGTACAATAACGAGTCGCAGTTTGATGTTCTAATATTTGGCCAGGGAAGCTCCTGTGAGAAGGCTGCTGCTTATTTTGTGAGGAAATGTGGTCATACAAATAAGAGAATCAGATATAACCGTTTGGAAGAAGTCAATTTCCCTTCTAATATTCGTGCTGGGCATGCTTCACCTGAGAAGTTTGTGCGTGGTGAGAGCATTGGAGTGCCGGCCATCATCCCCTCTGAAATCAGTAGTAAAGAGGCTTGTGATGCTGATGTGGAATTCGCCTCCCCTGTGACAGCAATTCCAATGGCCAGTACGGATCTCCAAACTAAAAGGAGAGGAGGAACCCGAGGATCTAAATCAATAGCTAACTTGATTGCTGATGCTCAGCCCATATCTGCGAGCAAAAGTAGGGCGAATGAAACATATATTTCAAACAGAAGGCCTGTCACAGAAGATGAGAAGACGACTGCCCTCCAATTAGCTCAGGCAGCGTGTACTGACAAAGGTTTCTACATAATCATGCGTCCCACACATGTATACAAGAGATTCTATGCGTCCATCCCTAGCAAGTGGTTAGCGGAACATCTTTCTCCTCACTCTGAAGATGTGATATTGCGCATGGGAGGGAATGAGTGGCATGCCAAATACAGCTTTGAACATGGTCGTCGAACTGGAGGACTGACTGGTGGGTGGAAACAGTTCGCTATGGACAACAACCTCGAAGAATTTGATGTTTGCGTGTTTGAACTAGTTGGTCAAAACAAGCCATTGATAATGGATGTGACAATATTCAGAGTTACTGAGGAGTGTACCCCTCTGGTTAAAGTGAGTTCTGTTGGAGGAAAACAAGTCCCAAATGGCATCCAACCATGGGAAGAAGGCCATCCTTAA 1176 0.4439 MGENCQSCRSWVDDIYWSRFQFVHFAHYLPNGFDRQLALPKSFSDNLRKKLPDNVTLKGPGGDVWSVGLTARNDTLHFTHGWEQFVKDHCLEENDLLIFKYNNESQFDVLIFGQGSSCEKAAAYFVRKCGHTNKRIRYNRLEEVNFPSNIRAGHASPEKFVRGESIGVPAIIPSEISSKEACDADVEFASPVTAIPMASTDLQTKRRGGTRGSKSIANLIADAQPISASKSRANETYISNRRPVTEDEKTTALQLAQAACTDKGFYIIMRPTHVYKRFYASIPSKWLAEHLSPHSEDVILRMGGNEWHAKYSFEHGRRTGGLTGGWKQFAMDNNLEEFDVCVFELVGQNKPLIMDVTIFRVTEECTPLVKVSSVGGKQVPNGIQPWEEGHP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2489 391 CDD B3_DNA 32 112 IPR003340 GO:0003677
Mibi08g2489 391 Gene3D - 19 118 IPR015300 -
Mibi08g2489 391 ProSiteProfiles B3 DNA-binding domain profile. 22 115 IPR003340 GO:0003677
Mibi08g2489 391 SMART B3_2 265 362 IPR003340 GO:0003677
Mibi08g2489 391 SMART B3_2 25 115 IPR003340 GO:0003677
Mibi08g2489 391 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 32 364 IPR044837 -
Mibi08g2489 391 CDD B3_DNA 265 360 IPR003340 GO:0003677
Mibi08g2489 391 SUPERFAMILY DNA-binding pseudobarrel domain 21 113 IPR015300 -
Mibi08g2489 391 Pfam B3 DNA binding domain 33 111 IPR003340 GO:0003677
Mibi08g2489 391 Pfam B3 DNA binding domain 265 360 IPR003340 GO:0003677
Mibi08g2489 391 ProSiteProfiles B3 DNA-binding domain profile. 265 362 IPR003340 GO:0003677
Mibi08g2489 391 SUPERFAMILY DNA-binding pseudobarrel domain 265 358 IPR015300 -
Mibi08g2489 391 Gene3D - 243 364 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2489 Mibi-ChrMibi08 42634099 42636699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2489 1 360 REM Transcription Factor Family AT4G33280 32.368 2.13e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi08g2489 B3 3.9e-14 CL0405