Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2478 ATGATTATGATAAGACGAGGATGGTCCCGCATAGTTAGAAAGAAAGGGTGCAACGACAAGAATCCTCGAATTCAACGCAGGAGGTCCAGATTAATTGATGATAACACTTTCTGTGTAAGCATGCTCGGAGAGAAGCCGCTGTCACATAACAACATGATACCCTTCGGCCTCAACGCTCAACCCAAGGTGTTTCGTGTCCCTTCTGTTCTTGCTTCTCCCTCTCCCTCCCATGGCCTCCACCTCGCAACATCTTCCTCTTTCTCTCACTCTTCCATGACGACTTCTCAACCTCCTCTAATGTCTTCTTCTCGCAGATCATCATCATCTTCTTCGTCTCCCACTCCTATTTCTCCTCTTACCCTAAAGCAAATTGACCTTGATTCTGCTGCCTCCAATGCCGCTTGTTTCGTTCACAGCTCGGAGCAATTAACTCCACATCGTCCTCGCCTTACTCGAGCTAGGAAGCTTCGATACCTTTCAGACCATGACGTTGGCCTCCACGTCTCTGACGATTCTTCACTCATGGCTTCTCCACCTTCCTCTCGCAAGTCTCGCTCATCTGGTGCTTTTGAACACTGGTCCTCCTCCGCCGTTCCTCAACCGCTACCGCTTCCTGAGTCGCCGTTGACTCGCCGGCCGGAGTCAACCTGTCATGCTCCCGGCCAGTTCCCTCTCGGATCTCCTTCCGTCGACCGTTCGGGGTTTGCTTTCGGGAGGAAGACGGTGGATCACGATGCATTCATAAACACGAAGTCTTGTGGCAATATGGTTAGATCCTGTGATCCAACCACTGCAAAGGCAAAGTCTAATTTGAGAGTAAACATCCCAGTTGCAAGTTTCTTCACAGGTCATAATTCATGTAAAGATCGAGCAATCTCTCGTGATATCGACTCTGAGGGTATTTGTGACTCAAGATGGCGTGTGGTCACAAAGAGTGCCCCAACAAGTGTTTTGTCCAGTCCTGTTGCAAGTCCACGGAGATTAAGCAATGTAGATTTTACTGATAATTTTATTAGCGCTCAAGAATTTCTTGACAACCCTATTGGCCATCCTTCGAAAGTGTCACCTCACTTGACTGCTCAAAGTCCTGATCATTCTTCTCTTCGTAGCCCAGGGTGCCGTAGTCCTTTCCTCAATCTCAACCATGTTGACGCACATCCTTTGCCTCTCCCTCTTCCTCCTGGAGCTTCACCACCAGCACAATCATCTGTGCAGTGTCAATCAAGTGCAACGCATCACTCATTTGAAACTCAATTTTCAATGAAAGGCCAATGGCAGAAACGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCAACAAACCTGGAGACCGGTGCCTCATGTGCAATGAAGGAGGTGGACCTCATTCTAGATGACCCTAATTCTGTCAACTCTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCATCAACTACACCATCCAAATATTGTGCAGTATTATGGCAGTGAAATAATTGGTGATCACTTGTGCATATATATGGAGTATGTTCATCCTGGGTCGGTTGAAAAATTTGTGCGGGCAAATGGTGAAGCGATGACGGAATCTGTAGTTCGCAATTTTACACGGCATATTCTCTCAGGGTTGGCTTACTTGCATAGTACCAAAACTATCCACAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCAAAAGTTCTAACAGGGAAATCATATGCCCTTTCTTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTAATGAAGGCTGCCATGATGAAAGATGAAAATCCTGACCTTGTCTATGCTGTTGATATCTGGAGCTTAGGTTGCACTATCATTGAGATGCTGACAGGAAAACCTCCCTGGAGTGATTTTGAAGGGCCTCAAGCCATGTTCAAGGTATTGCACAATTCGCCACCTATACCAGAAACATTATCTTCTGCAGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCTGCAAATCGCCCATCAGCAGCAAAGCTTCTTGAACACGCCTTTATACAAAATTTTAATGATCAAGATGCTTTAGCTCGCCCACAATTATATCCTAGAGAAAACCCTGAAGATAATTCACGTAGTCCCAAAGACACTCCTGCACATAAGCGTGATGTAAATCGAGCCTCCATGGGCGCACGGTTCATCAGCAAAATCCAGAAACTAATCGGTGATTCTTCCCAACAATATAATGCTGAGGGTTCTAAATATTCTACATCTCATCCTCCTCCTTACTCTCTGCCAGAAGTTAAAATTCCTCAGTCGTCCTTGAAACCGGCTGCCTTCAATTACGTTTCTGCTCCAAAATCCAGCAACATGTCCCTCGCTGTAATGAGATTCATCACGCACCTTTGA 2406 0.458 MIMIRRGWSRIVRKKGCNDKNPRIQRRRSRLIDDNTFCVSMLGEKPLSHNNMIPFGLNAQPKVFRVPSVLASPSPSHGLHLATSSSFSHSSMTTSQPPLMSSSRRSSSSSSSPTPISPLTLKQIDLDSAASNAACFVHSSEQLTPHRPRLTRARKLRYLSDHDVGLHVSDDSSLMASPPSSRKSRSSGAFEHWSSSAVPQPLPLPESPLTRRPESTCHAPGQFPLGSPSVDRSGFAFGRKTVDHDAFINTKSCGNMVRSCDPTTAKAKSNLRVNIPVASFFTGHNSCKDRAISRDIDSEGICDSRWRVVTKSAPTSVLSSPVASPRRLSNVDFTDNFISAQEFLDNPIGHPSKVSPHLTAQSPDHSSLRSPGCRSPFLNLNHVDAHPLPLPLPPGASPPAQSSVQCQSSATHHSFETQFSMKGQWQKRKLIGRGTFGSVYHATNLETGASCAMKEVDLILDDPNSVNSIKQLEQEIKILHQLHHPNIVQYYGSEIIGDHLCIYMEYVHPGSVEKFVRANGEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGKSYALSLKGSPYWMAPEVMKAAMMKDENPDLVYAVDIWSLGCTIIEMLTGKPPWSDFEGPQAMFKVLHNSPPIPETLSSAGKDFLQRCFERDPANRPSAAKLLEHAFIQNFNDQDALARPQLYPRENPEDNSRSPKDTPAHKRDVNRASMGARFISKIQKLIGDSSQQYNAEGSKYSTSHPPPYSLPEVKIPQSSLKPAAFNYVSAPKSSNMSLAVMRFITHL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2478 801 FunFam Mitogen-activated protein kinase kinase kinase 5 422 723 - -
Mibi08g2478 801 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 88 699 - -
Mibi08g2478 801 MobiDBLite consensus disorder prediction 168 227 - -
Mibi08g2478 801 MobiDBLite consensus disorder prediction 75 119 - -
Mibi08g2478 801 ProSiteProfiles Protein kinase domain profile. 425 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2478 801 MobiDBLite consensus disorder prediction 348 371 - -
Mibi08g2478 801 ProSitePatterns Protein kinases ATP-binding region signature. 431 454 IPR017441 GO:0005524
Mibi08g2478 801 MobiDBLite consensus disorder prediction 173 194 - -
Mibi08g2478 801 MobiDBLite consensus disorder prediction 355 371 - -
Mibi08g2478 801 MobiDBLite consensus disorder prediction 701 727 - -
Mibi08g2478 801 SUPERFAMILY Protein kinase-like (PK-like) 402 715 IPR011009 -
Mibi08g2478 801 MobiDBLite consensus disorder prediction 77 119 - -
Mibi08g2478 801 Gene3D Transferase(Phosphotransferase) domain 1 422 725 - -
Mibi08g2478 801 SMART serkin_6 425 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2478 801 Pfam Protein kinase domain 426 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2478 801 MobiDBLite consensus disorder prediction 707 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2478 Mibi-ChrMibi08 42530218 42537402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2478 146 688 MAP Kinase Kinase Kinase AT5G66850 46.453 3.75e-144 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi08g2478 Pkinase 9.1e-68 CL0016