Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2451 ATGGACAAGAGGCAGGTTTTGGTGAGCCAAGGTTTTGGAATTCTCGAAATGGGTAGGTGTTGGTTGGTTGGGATTTTGGTTGTTTTGGCGAATGCGTGGTCCTTAGTCCAAGGATTCCCCTCGGAAGATCTGGTGGTGGCTCTTCCTGGCCAACCCAAGGTTGGGTTTAGGCAGTTTGCTGGGTACGTTGATGTAGATGTCAGCCATGGAAGGAGCTTGTTCTATTACTTTGTGGAGGCTGAAAAGGACGCCGACCTAAAGCCCCTTACCCTCTGGCTTAATGGAGGTCCTGGATGTTCTTCCATTGGAGGAGGTGCTTTCACTGAATTGGGTCCATTCTATCCTCATGGTGATGGCCGTAGACTCCGAAGAAATAAAATGTCTTGGAATAGAGCATCTAACCTCTTGTTTGTGGAGTCCCCTGCCGGAGTGGGATGGTCATACTCAAATACAACTTCAGATTATAACTGCGGAGATGCTTCCTCCGCCAATGATTTGCATTTATTCATGATGAAATGGTACGACAAGTTTCCTTCATTCAGAACAAGGGAATTATTTCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCTGATGCTCTGCTGAACCATAACGAAGCCTCAAGTGACTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTGCTGAGACTGGATCGGGACATTCCGTCAACATATGAATACTTCTGGTCGCACGGAATGATATCTGATGAAGTAGGCCTTACCATTATGAATGAGTGTGATTTTGATGACTATGTCATGGCAAGTCCTCACAATGTGTCCCATTCTTGCAACCGTGCCATATCAGAGGCAAACCGCATAGTTGGGGAATACGTCAACAATTATGATGTGATTCTGGATGTTTGCTATCCATCCATAGTTGAACAAGAACTCAGATTAAAAAAGATGGCCACCAAAATGAGTTACGGTGTAGATGTTTGTATGACTCTTGAAAGACGTTTTTACCTGAATCTTCCAGAGGTTCAGAAGGCTCTCCATGCTAATAGAACCAATCTACCATATGCCTGGTCTATGTGTAGCAGCCTTTTGAATTATAACGAGACTGATGGGAACATCAATATCCTTCCGATTCTCAAGAGGATCGTTGATAATAAAATCCCAGTTTGGGTTTTCAGCGGAGACCAAGATTCAGTGGTACCATTACTGGGTTCTCGAACACTGGTTCGTGAACTAGCCCATGACCTGAAGTTCGAAGTGACAGTGCCATATGGAGCATGGTTCCACAAAGGGCAGGTAGGAGGTTGGATAACCGAGTATGGAAACTTGTTGACTTTTGCGACGGTGAGAGGGGCGGCTCACATGGTGCCTTATGCTCAGCCTTCAAGATCTCTTCATCTTTTCAGTTCATTTGTGCGTGGCCACCGATTACCCAACACCACTCGTCCTTCCATTGATGATTTACTAACTAGCTAA 1470 0.449 MDKRQVLVSQGFGILEMGRCWLVGILVVLANAWSLVQGFPSEDLVVALPGQPKVGFRQFAGYVDVDVSHGRSLFYYFVEAEKDADLKPLTLWLNGGPGCSSIGGGAFTELGPFYPHGDGRRLRRNKMSWNRASNLLFVESPAGVGWSYSNTTSDYNCGDASSANDLHLFMMKWYDKFPSFRTRELFLTGESYAGHYIPQLADALLNHNEASSDFKFNIKGVAIGNPLLRLDRDIPSTYEYFWSHGMISDEVGLTIMNECDFDDYVMASPHNVSHSCNRAISEANRIVGEYVNNYDVILDVCYPSIVEQELRLKKMATKMSYGVDVCMTLERRFYLNLPEVQKALHANRTNLPYAWSMCSSLLNYNETDGNINILPILKRIVDNKIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKFEVTVPYGAWFHKGQVGGWITEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFVRGHRLPNTTRPSIDDLLTS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2451 489 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Mibi08g2451 489 Gene3D - 373 472 - -
Mibi08g2451 489 FunFam Carboxypeptidase 39 303 - -
Mibi08g2451 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Mibi08g2451 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Mibi08g2451 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Mibi08g2451 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Mibi08g2451 489 Gene3D - 326 362 - -
Mibi08g2451 489 SUPERFAMILY alpha/beta-Hydrolases 42 475 IPR029058 -
Mibi08g2451 489 Gene3D alpha/beta hydrolase 40 302 IPR029058 -
Mibi08g2451 489 FunFam Carboxypeptidase 373 472 - -
Mibi08g2451 489 Pfam Serine carboxypeptidase 50 472 IPR001563 GO:0004185|GO:0006508
Mibi08g2451 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2451 Mibi-ChrMibi08 42297669 42300618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2451 332 475 Calmodulin-binding Proteins AT2G22960 25.694 1.49e-11 61.6