Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2443 ATGTACATAACAGATTCTTACTCCAGCGAGAGCTATGAGAAATACTTCCATGATTCACCAACTGAGGAACTAATAGAAACTTCTACTTCCAGCATCTCAGGAAACTCGCTGCCTGATGGCTCTTCCTATCTGGTTAGAGGTAGTTCAGGAGCTTCTGTGGTTTCTAGCAACCCATTTGACGTTTCTTTTGTCTCCATGGGACATGGTGGTGTTTGTCAATCCAGCTTCGGGTCAGATTTCTTGGAAAACGAAAGCCAAGATCCACTTGACTTTGATGATCAAATGAAATCAAAACTCCAAGAACTAGAGAGGACTCTGCTTGGCGATTACAATGATGATTATGAGGAGGAGCTCATACTTGGGACTTTTCAAAGCATGGATATTGATGCTGAGTGGGCTGAACCCTTTCAAAATAAGCTGCAGCATAGCTCACCAAAAGAGTCTTTATCCTCAGATTCTAACCATAGTAGCATCAACAGTATTTCTTCTCGTACCCCAAAGCAGTTGTTGTTAGAATGTGCCAATGCGATTTCAGAAGGAAATGCAGAGGAAGCCTCGTCTATGATAAATGAACTCCGGCAGATGGTATCGATTCAGGGTGATCCTTCCCAGAGGATTGCAGCCTATATGGTGGAAGGACTTGCAGCTCGAATGGCTGAATCTGGCAGCAGTATTTATAAAGCACTGAAGTGTAAGGAACCTCCTTCATCAGACCGACTAGCAGCTATGCAGATACTGTTTGAGGTGTGCCCATGTTTTAAATTTGGATTTATTGCTGCAAATGGTGCAATTACGGAGGCAGTTCAAGGTGAAAAGAAGGTTCATATAATAGATTTTGACATCAATCAAGGGAATCAATACATAACTCTGATACAAGCACTTGCTTCAAGGCCAGGTAAGCCACCACATGTGAGATTAACTGGGGTTGATGATCCTGAGTCTGTCCAGAGGTCTGTTGGAGGCCTAAAAATCATTGGACAAAGACTTGAAAAACTGGCAGAAATACTAGGATTGCCATTTGAATTTCGAGCAGTGGCATCAAGGTCTTCCCTTGTCGCTCCATCAATGCTTGATTGTCGTCCTGGGGAAGCACTTGTGGTAAATTTTGCATTCCAGCTTCATCACATGCTAGATGAGAGTGTCTCAATGGTAAATGAACGGGACCAACTTCTTCGCATGGTTAAAAGCCTGAATCCAAAACTTGTCACCGTTGTTGAACATGATATGAACACCAATACCCTTCCGTTTTTTCCAAGATTTGTTGAAGCCTACAGCTACTATTCAGCTGTGTTTGAGTCGCTGGATGCAACTCTTCCTAGAGATAGTCAGGATAGGATGAATGTTGAAAGGCAATGCCTAGCAAGAGACATTGTCAATATTGTTGCATGCGAAGGTGAGGATAGGATTGAACGATATGAAGTCGCCGGAAAATGGAGGGCAAGGATGAAAATGGCCGGCTTCTGTACATCCCCAATGAGTGCCGATGTGAGTGACTCAATTGAGAAACTCATTAAGCAGTACTGTGACAAGTACAAGATGAAGGACGTGATGGGTGCACTTCATTTTGGGTGGGAGGACAAGAACTTGATTGTTGCTTCCGCATGGAGGTGA 1611 0.4345 MYITDSYSSESYEKYFHDSPTEELIETSTSSISGNSLPDGSSYLVRGSSGASVVSSNPFDVSFVSMGHGGVCQSSFGSDFLENESQDPLDFDDQMKSKLQELERTLLGDYNDDYEEELILGTFQSMDIDAEWAEPFQNKLQHSSPKESLSSDSNHSSINSISSRTPKQLLLECANAISEGNAEEASSMINELRQMVSIQGDPSQRIAAYMVEGLAARMAESGSSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVQGEKKVHIIDFDINQGNQYITLIQALASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEILGLPFEFRAVASRSSLVAPSMLDCRPGEALVVNFAFQLHHMLDESVSMVNERDQLLRMVKSLNPKLVTVVEHDMNTNTLPFFPRFVEAYSYYSAVFESLDATLPRDSQDRMNVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMKMAGFCTSPMSADVSDSIEKLIKQYCDKYKMKDVMGALHFGWEDKNLIVASAWR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2443 536 MobiDBLite consensus disorder prediction 139 161 - -
Mibi08g2443 536 Pfam GRAS domain family 167 536 IPR005202 -
Mibi08g2443 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 148 531 IPR005202 -
Mibi08g2443 536 ProSiteProfiles GRAS family profile. 157 536 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2443 Mibi-ChrMibi08 42227113 42228723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2443 5 536 GRAS Transcription Factor Family AT1G21450 64.273 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi08g2443 GRAS 2e-138 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2443 08 42227113 42228723 Mibi05g0258 05 2577044 2578795 CCT
Mibi08g2443 08 42227113 42228723 Mibi08g2443 08 42227113 42228723 ECH