Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2441 ATGGAGGATTCTAATTTTGTGGCAACTGCTTCATCCGCAGGTGATCACGACTCCAAGACCTGTCCTCGCGGCCACTGGAGGCCAGCCGAGGACGAAAAACTCCGGCAACTCGTCGAACAATATGGTGCTCAGAACTGGAATTCAATAGCCGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTAGATCCGAGGATCAACAGGAGGCCATTTACAGAAGAAGAGGAAGAAAGGTTACTGGCAGCTCATCGTATTCATGGGAACAAGTGGGCACTAATAGCTAGGCTTTTTCCTGGTCGCACTGATAACGCTGTGAAGAATCACTGGCATGTTATCATGGCGCGAAAGCAAAGAGAGCAATCCAAGCAGTTAAGTGGTGGCAAGAGAGTCTTCCAAGATGTTTTCAATATTAATGATTCTTCCACTCTCACTTCCTCTTCTAATAAAATATCAAAACCTCATGATATCTTTACTTCCCAATCTTTCTTTGACTTCCGGAACATGGGTAAAAGTAGAATCCTTACGGAATATAATTCTCCCTCCTTCTCTTTGGCTTCTTGGAATTTCTCATCCATGGCAAAACAACAAGGGAAGGATAGTAGTTACTTCAACCCCTGCTTTAACATTTACTTCTCAGAATGTTCAAAAGGTACGGATAGATATCTTTACAGAATTTTTCCAAATTCTGCACCATCGTACGGCAGCATTCTACCAAATAACTACGGGAAGCTTGATGTTCCAAGAGGTTGTGATGGTGATGATAAGGAGAGAAATGGGACGAAAAATGAGTTGACGAATGCAAGTGACATCTCACCCACATTTGCAAAGAAGAGGGCTTCCACGGAACAAGAGAAAGCAGATGGTCACAGAGAAGTTCCCTTCATTGATTTCCTGGGCGTGGGCGTGCCATCGTCATAG 939 0.4409 MEDSNFVATASSAGDHDSKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKQLSGGKRVFQDVFNINDSSTLTSSSNKISKPHDIFTSQSFFDFRNMGKSRILTEYNSPSFSLASWNFSSMAKQQGKDSSYFNPCFNIYFSECSKGTDRYLYRIFPNSAPSYGSILPNNYGKLDVPRGCDGDDKERNGTKNELTNASDISPTFAKKRASTEQEKADGHREVPFIDFLGVGVPSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2441 312 Gene3D - 23 74 - -
Mibi08g2441 312 Pfam Myb-like DNA-binding domain 26 86 - -
Mibi08g2441 312 FunFam MYB transcription factor 23 74 - -
Mibi08g2441 312 Gene3D - 77 136 - -
Mibi08g2441 312 SMART sant 22 71 IPR001005 -
Mibi08g2441 312 SMART sant 74 122 IPR001005 -
Mibi08g2441 312 SUPERFAMILY Homeodomain-like 22 116 IPR009057 -
Mibi08g2441 312 ProSiteProfiles Myb-like domain profile. 23 69 IPR001005 -
Mibi08g2441 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Mibi08g2441 312 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mibi08g2441 312 MobiDBLite consensus disorder prediction 256 295 - -
Mibi08g2441 312 CDD SANT 86 117 IPR001005 -
Mibi08g2441 312 MobiDBLite consensus disorder prediction 1 16 - -
Mibi08g2441 312 MobiDBLite consensus disorder prediction 270 284 - -
Mibi08g2441 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Mibi08g2441 312 FunFam MYB transcription factor 76 145 - -
Mibi08g2441 312 MobiDBLite consensus disorder prediction 1 26 - -
Mibi08g2441 312 CDD SANT 26 67 IPR001005 -
Mibi08g2441 312 PANTHER MYB PROTEIN-RELATED 23 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2441 Mibi-ChrMibi08 42189252 42190615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2441 21 129 MYB Transcription Factor Family AT1G17950 84.404 8.44e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g2441 Myb_DNA-bind_6 2.2e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0259 05 2593703 2595166 Mibi08g2441 08 42189252 42190615 CCT
Mibi08g2441 08 42189252 42190615 Mibi08g2441 08 42189252 42190615 ECH