Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2434 ATGGAGAACCCAAATACACATTCTTATGTCATCATTGCATGGGATGCCACCAAAGATCGCAATGAGAACGACATAAAGCTCATGGTTGATAACATTCGAAGTAAGAGTGGCATCCTCGGTGCAGGTCATAAATTGCTTGTGCTCGGCCTTCTGTATAAGGTGGCCCATCCCATGGGATACCAGACGTTAGCATGCCCCGAGTCTTTTGCTGGCACAAACTTGCGTGCAATGGAGGACGAAGTCAGGAGGAAAGTGGAAGCCTTTGCAAGCTTGCTTTTGCCAACTTTCCAAGTTTGCCAAAAAGAGGGGGTTGGCATTGAAGTCAAAGTCACCACAGGTTTTCCAGTTAAGCAGGTTATATTACAAGAGATTGCACACTATAATGCAGATTGGATCATACTCGATAGGCATCTTCGACGAGATCTGAGATATCATTTGAACAAGATACCATGCAAGGTTGCATTAGCTAGGGATGATTTTACTGTGGAGACCTGGAGATCTCACCATTCTCGGGAAGCAGATGTCATAGACCGCAAGCCAGTCTATTCTCTCTACCACGTTGTTTCTCTATCAGATGGTCTTAATTTCGAAGACCCCGAGAGTTGTACCATCTCTTTCAGAAGTTATCCCACATCTTCTAATCCTCATGATAACTCTGATTTTCAATCAAATGCTAGAAGGTCAGAGGAGAACATTTCTTCATCAGATATTGGACCTCCTTCTACGCAAGAAAATTCAGGTGCACCAATTCTTTGTGCTGGTTGTGGGATAAGGACGGAATTGTGCACGAAGGAATCAATGAGGTTCAACTTTTCTGACATACAGAAGGCAACAAACAATTTTTCAAATGATAACTTGCTGGGTGAAGGTGGATATGGTCATGTATATAAGGGTGTGCTTAGAGATGGACAGGAAATTGCTGCCAAGGTGAGGAAAGAAGAAAGCAGCCAAGGGTCTTCTGAATTCAATTCTGAGATTTATGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTCCTAGGTTACTGTTGCAAGGAAAGGCAAAATATTCTGGTGTACGAATATATTTGCAATAAATCTCTTCACTGGCACCTGTATGATAAAAACGCAAAAGTTCTAGAGTGGCACCACAGATATGGCATTGCCATTGGAACTGCAAAGGGATTGCGTTTCCTGCACGAGGAATGCCGTGGAGGACCAATAATTCACCGAGATATGCGACCAAGCAACATACTTCTCACTCATGACTTTGTTCCCATGCTAGGTGATTTTGGTCTGGCCAAATGGAAGATAGATGATGAAACTCTGCGGACAAGGATAATGGGCACACTGGGATACCTTGCTCCAGAGTATGCTGAGAATGGCGTTGTCTCGGTACGGACAGATGTGTATGCATTCGGCATTGTTCTGTTACAGTTGATATCAGGAAGAAAGGTGCTCAATGACAATCATCTACAACATCTCTCTCTCCGACAGTGGGCGGCGCCATTGATTGAGAAGTTGGCTTTCAGTGAACTTGTTGACCCTCGTCTTGGGGAATCATATGACACAGACGAATTATACCTCATGGCCAAAGCAGCCTACTTTTGTGTCCAACGAAGCCCTGGATTGAGACCTTCCATGGGAGAGGTTGTGCGACTTCTTGAGGGAACCTGCCCACTTGGCCATTTTGGGAGACAATTTTGA 1689 0.4423 MENPNTHSYVIIAWDATKDRNENDIKLMVDNIRSKSGILGAGHKLLVLGLLYKVAHPMGYQTLACPESFAGTNLRAMEDEVRRKVEAFASLLLPTFQVCQKEGVGIEVKVTTGFPVKQVILQEIAHYNADWIILDRHLRRDLRYHLNKIPCKVALARDDFTVETWRSHHSREADVIDRKPVYSLYHVVSLSDGLNFEDPESCTISFRSYPTSSNPHDNSDFQSNARRSEENISSSDIGPPSTQENSGAPILCAGCGIRTELCTKESMRFNFSDIQKATNNFSNDNLLGEGGYGHVYKGVLRDGQEIAAKVRKEESSQGSSEFNSEIYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLHWHLYDKNAKVLEWHHRYGIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKIDDETLRTRIMGTLGYLAPEYAENGVVSVRTDVYAFGIVLLQLISGRKVLNDNHLQHLSLRQWAAPLIEKLAFSELVDPRLGESYDTDELYLMAKAAYFCVQRSPGLRPSMGEVVRLLEGTCPLGHFGRQF 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2434 562 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 253 356 - -
Mibi08g2434 562 MobiDBLite consensus disorder prediction 207 245 - -
Mibi08g2434 562 CDD USP_Like 66 156 - -
Mibi08g2434 562 CDD STKc_IRAK 287 551 - -
Mibi08g2434 562 Gene3D Phosphorylase Kinase; domain 1 255 356 - -
Mibi08g2434 562 ProSitePatterns Tyrosine protein kinases specific active-site signature. 402 414 IPR008266 GO:0004672|GO:0006468
Mibi08g2434 562 PANTHER OS01G0750732 PROTEIN 249 554 - -
Mibi08g2434 562 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Mibi08g2434 562 ProSiteProfiles Protein kinase domain profile. 281 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2434 562 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 357 555 - -
Mibi08g2434 562 Pfam Protein kinase domain 282 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2434 562 SUPERFAMILY Protein kinase-like (PK-like) 265 547 IPR011009 -
Mibi08g2434 562 Gene3D Transferase(Phosphotransferase) domain 1 358 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2434 Mibi-ChrMibi08 42129246 42132700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2434 232 550 Trihelix Transcription Factor Family AT5G38560 42.813 3.29e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi08g2434 Pkinase 9.5e-40 CL0016