Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2429 ATGAAGTTATTGAGTGGTATAATCACACTGAGCTTGTTCATTATTGCTGCAGAAACTGTTAGATCGGTGTCGGGTCAGACCCGACCCGGTTGCAGCGGCACGTGCGGCAACCTCACCATTCCGTACCCATTCGGTACAAGAGAAGGTTGCTACAGAGACGAAAATTTCTTCATATCCTGCGAAGACACTTCATCCTCTGCAAACTACTCCTCGGGCAATATTCAAGTGTTGCACATCTCTCTCGACGGTCACTTACGTCTCTCCGGCTGGGTTGGCTCTAATTGTTACCTTCCCTCTCCTCGCCGCAACTTCGTGTACTTTCAACTCAGTCGTTTTGCTATCTCCAACACTCAGAATAAATTCACCGTCATCGGCTGCGATACCTACGCTTTCATCGATGATTTTTGGGGAAGAAGGTTCTCTACTGGCTGTTCCTCCACTTGCAGTAACGTTGCTGACATGGTCAATGGAACCTGCTCTGGAATTGGCTGCTGCCAAACCAGTTTCCCCACCGGGAATATGGGTTACAATATCAGTATATCCAGCTATCGTAACCATTCTCGAGTTTTGGACTTCAATCCTTGCGGTTTTGCTTTTGTGGTTGAAGACGGTGCTTTCAATTTCTCTTCCCTAGACCTCCTCGATCTGCGAGGGAAGAGAGATTTCCCTATCATCGTTGATTGGGCTATTTGGGATGGGAATTGCTCCGAAGCAATCAAGAATAGAAGCAGCTATGCTTGCATGGACAATAGCTTCTGTGTGGATTCGGAAAATACTCCTGGCTACCTCTGCAGATGCAATGAAGGGTTTCGAGGGAACCCTTACCTGTCTGGTCCTGATGGTTGCCAAGATACAGACGAGTGTGGCAACAGCACATTAAATCTCTGCAGTCAAACTTGCCACAATTTGTACGGCACCTACAATTGTTCTTGCCGACCTGGATACATAGGCAACGGTTTCAAGAACGGAACGGGATGCGTTTTAGTGAATAAATCCAATAAGGCCCCAATAACTCAAGTTTCTCTAGGCATCAGCGTATTCTTCTTGGTTCTTGGAATTGTCATATCCTCCTTATGTTGGGTAGGAAGGAAAAGAAAGCTCGAAAACGTCAGAAAGAAGTTCTTCGAGAAGAATGGGGGTCTCATGCTTCAGGAACAACTTTCCGAACGACATAATTACAATGAAATGGCTAAGCTATTTACCGAAGAGGAGCTCAAAGAAGCCACAGATAACTTCCATGACAGCAAAATTATTGGGCGTGGAGGACAAGGAACAGTTTACAAGGGAATGTTACCAGATAAAAGAGTGGTTGCCATTAAGAAGTCCAGAATAGCAGAGCAAAGCCAAGTCAAAGATTTCATCAACGAAGTGATTGTACTCTCACAAATCAAACACAGGAATGTAGTCAAACTCCTGGGTTGTTGCTTGGAAACTGAAGTTCCTCTGCTAGTTTATGAGTTTGTCCCTAATAATACTCTGCTCCACCATATAGGCCCATCAATGAAAACACCATGTCTTCCATGGGAAACTCGGTTAAGGATAGCTGCTGAAACTGCTGGAGCCATATCATACCTTCATTCTTCAGCTTCCATTCCAATCATTCACAGGGATATAAAGTCTACCAACATACTCTTGGATCACAATTACACAGCAAAGGTATCTGATTTTGGAGCCTCTAGGTTGGTTCCTCTAGACCAGACAGAAATCACCACTCTTGTACAAGGGACATTGGGATACTTGGACCCTGAGTACCTACAAACCAGCCAGTTAACTGAGAAAAGCGATGTCTATAGCTTCGGGGTGGTTCTTATAGAGTTGTTGACCGGAAAGAAGGTGGTTGAAGTGAGCAGGCAAGAAGAAGAAAGAAATTTAGCTATGTACTTTGTTTCTTCTATGGAGAAAGACCGTTTGCTTGAAATTCTAGACAGTAGAGTGTTGGATGAGAAAAATGCAGGGAAACTTCAGGAAGTTGCCGTATTGGCAAGTAGATGTGTAAGAGTAAAGGGGGAAGACAGGCCAACCATGAAGGAAGCATCAATCGTGCTTGATGGTCTGATAGCCAAGGAAAGGCACCCGTGGGATGGAAAATATTTAAATTCCGCGGAATCTGAATTCTTGCTTGCTCCAACATATGGAACCGAAGGCGCTACTAGCAATTCTGTGGGGTTTGAAAGCATGGGGAACCAACTTGCACTTGCGATGGAAAGTGGACGCTGA 2217 0.4488 MKLLSGIITLSLFIIAAETVRSVSGQTRPGCSGTCGNLTIPYPFGTREGCYRDENFFISCEDTSSSANYSSGNIQVLHISLDGHLRLSGWVGSNCYLPSPRRNFVYFQLSRFAISNTQNKFTVIGCDTYAFIDDFWGRRFSTGCSSTCSNVADMVNGTCSGIGCCQTSFPTGNMGYNISISSYRNHSRVLDFNPCGFAFVVEDGAFNFSSLDLLDLRGKRDFPIIVDWAIWDGNCSEAIKNRSSYACMDNSFCVDSENTPGYLCRCNEGFRGNPYLSGPDGCQDTDECGNSTLNLCSQTCHNLYGTYNCSCRPGYIGNGFKNGTGCVLVNKSNKAPITQVSLGISVFFLVLGIVISSLCWVGRKRKLENVRKKFFEKNGGLMLQEQLSERHNYNEMAKLFTEEELKEATDNFHDSKIIGRGGQGTVYKGMLPDKRVVAIKKSRIAEQSQVKDFINEVIVLSQIKHRNVVKLLGCCLETEVPLLVYEFVPNNTLLHHIGPSMKTPCLPWETRLRIAAETAGAISYLHSSASIPIIHRDIKSTNILLDHNYTAKVSDFGASRLVPLDQTEITTLVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLIELLTGKKVVEVSRQEEERNLAMYFVSSMEKDRLLEILDSRVLDEKNAGKLQEVAVLASRCVRVKGEDRPTMKEASIVLDGLIAKERHPWDGKYLNSAESEFLLAPTYGTEGATSNSVGFESMGNQLALAMESGR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2429 738 SMART egfca_6 284 327 IPR001881 GO:0005509
Mibi08g2429 738 SMART egfca_6 232 283 IPR001881 GO:0005509
Mibi08g2429 738 Pfam Protein kinase domain 412 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2429 738 CDD STKc_IRAK 418 685 - -
Mibi08g2429 738 FunFam Wall-associated receptor kinase 2 382 487 - -
Mibi08g2429 738 FunFam Wall-associated receptor kinase 2 233 283 - -
Mibi08g2429 738 Pfam Wall-associated receptor kinase galacturonan-binding 31 84 IPR025287 GO:0030247
Mibi08g2429 738 SMART serkin_6 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2429 738 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 300 311 IPR000152 -
Mibi08g2429 738 SMART egf_5 234 283 IPR000742 -
Mibi08g2429 738 SMART egf_5 287 327 IPR000742 -
Mibi08g2429 738 Pfam Calcium-binding EGF domain 284 318 IPR001881 GO:0005509
Mibi08g2429 738 CDD EGF_CA 284 317 - -
Mibi08g2429 738 Gene3D Phosphorylase Kinase; domain 1 377 487 - -
Mibi08g2429 738 Gene3D Transferase(Phosphotransferase) domain 1 488 698 - -
Mibi08g2429 738 FunFam Wall-associated receptor kinase 2 488 704 - -
Mibi08g2429 738 ProSiteProfiles Protein kinase domain profile. 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2429 738 SUPERFAMILY EGF/Laminin 283 319 - -
Mibi08g2429 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Mibi08g2429 738 SUPERFAMILY Protein kinase-like (PK-like) 393 685 IPR011009 -
Mibi08g2429 738 Gene3D Laminin 234 319 - -
Mibi08g2429 738 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Mibi08g2429 738 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 685 IPR045274 GO:0007166
Mibi08g2429 738 FunFam Fibrillin 2 284 322 - -
Mibi08g2429 738 ProSitePatterns Calcium-binding EGF-like domain signature. 284 309 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2429 Mibi-ChrMibi08 42075757 42078537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2429 1 738 Receptor kinase-like Gene Family AT1G21230 46.533 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mibi08g2429 Pkinase 7.5e-48 CL0016