Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2419 ATGGATCATCCTTCACACTTCCATCAGCATCAGCACCAGCACCAGCATGCAAGGTACGCTCCTCTTCCCCATCATCATCATCCTCATCCTCGCCATTCACAGTTCCCCGAAGATCCCCGTTTTCGCCCTCACCCCCTTCCTCCGCCGCCTCCTCCTCCTGCGGCTCCGGCACCGGCTCTTCCGCCGCCGCCCCCTTCGCCTTCTCTTTCCTATCGAACCGGCCGTACCCCTCCGCCACCGCATCCTCACCCTTACAATAATCCTCCTCATCAATCCCTTCAGTTTAACTATGCCCACCCTCCAATTGAAGAAGAACGCCCTGTACATGATTTCACGCACTCGCAGAGGGTTTCTAATCGGATGATCATTGATAATGACCGTCCTCGCCAAAGTCTCCCTGATTTGGATTATCGAATTGCCGATAACCGAATCGGTGGTGGTTGGAACCCTCCTAGGGTTTCGTCGGATAATCGGCCTTCGAGGCCTTACCCTCCTCCCATTGACTTTGATCGGGAATTGCATCATAATCACAAAGTCGCGCCGCCATATCCGCCGATTGACAAAGTTAGGTGTAATTCAGACGGAAACTTTAGGGGAAGAGTTGATCACATTGATGGGTATGATGTCAATACCATGGTAGACTTTGCATGGGCCGGCAGAGGTGATGACAACTATCATTGCCGCAGGGATTTTGGATCAAACCTCAATGAATCTTCTGGAGACTTTGGAATTATTCCCAGACAGATTACATCATTGAGGGATCTTGATTCGAAAAATAGGGATTATGTGCATTACGGCGTGGAACGGGACAGCGAAATATCCAGGGTTAATAGGAGAGATGGACCTGGTGATAGCAAGAGGTGGGTAAATGATAGGAAGGGCACCAGAGACCCGCACAGTTCATCTTTTGAATTTGGAAACAACGAGAACGGTGGTGATGGTATTCCGGTGACATCCAGGAATTATTATGGTTCGGAATTGTGTAGATATAGTAATAGAGGGAACAGGGAATCTGGTCATGAATTTAGTCGTGCTCCAAAGAAACAAATACAGAAAAAGAGCGCACTTCTTAGAATTCAAATGGCAAAACCAAATCATAAGAACCGTGAGGTTGAACAGTTACAATATACCAGCTATGGTGATGACTCAAACTCTAACTCCTTTAGAGGCAAAGATCATTTTGAGCATTCAGGTTTTGGGGTAAAAACAGAAGAGAGAGATAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGTAGATATAACCTCTGTTTCTGATACAGATTTTACTCCTGCAGAAAAGGGTAAGAATGGTTTGGCCTCTGATAGCGATTCTCCTGATTTAAAACCTGCCAAACCATCTATGGCTGCTGTAAACTTAGGTGGCTCACCTTGCAAGGTGAATCGCATCCCTAGTTCCGGCAAGGAACTTAACTTACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCCTTGTGCCAGTGTAACTGCTAATTGTCATGTTAAAAATAAGGGGGCTCAAACCCCGAAGGGAGTTGTTTCTCATGAAAGTACTAACCCTTGTTCTGGTAAAACATCTACAAGGGCTGCTAAGAAGAAAAAAATTGTAAAGAAAGTGGTGAAGAAAGTTGTTTCAAATCCTAATTTAAACATCTCACATTCCATGCCATCAAATATGTCTAAGGGAACTACGAAAGCTTGTAGTGTTGGTCCCTCATCTACCTCTGGATTTGACAAAACTTCTTTGAAAGAGAAAATAACTGCTGATGACAAGATGTCATTGCCAGATAATTTGCTGTCTTCTCCAAAGGAAGGACATCTGCTGCCTGGTAATAGAAAGGAAGATATATCTTTGCTTGGTATTGGGCCACATACCAGCCCACAAGAGCATGAGGTTGATGATAACGCTGATGTTGGGCAAGTAGATAGAATTGAAAGAAATGAAAACATCTCTAATTCTTCATTGGGTGCTTTTAGTACTAAAGATGAAAAGAATGATTTTTATTGTCCAAATGCAGGTGATTTTGTCCATGACTTGCATAGTGGTCCAAGTACTGACAAGGCTGCTGAGGCTAAGTCAACAAATGGAATCGCCTTTTCTGATATTAGTAACAGTGATGATGTTAATATGGAGCTTTGTCAAAATGAAGTGTCCCCATCACCTCAGCAGTATTCAGATGTACAATATTTAGATAATCAGTTTCATGTAGAAGATGATATGAACTGCAGACTGTCAGCATCAGCTGAAAGTGTCATTAACACAGATGTTATAAACACTTGTAATTCTGCTAATGTTAGTCTGGCTTTCTTATGTTCTAATGATCTTACTGGTAATGCCCAAAAGAGCATTACAGTTTCTGACTTTGGAAAAGATGGCAAGATAGATTTCAAAAGTGAAGCCCTTGCATTATCTGAAAGTGTTATTTTGGAAGAAAACCCAGAGAGTTGCTCCCCTGTGCCAAGTGGTGGAGTGGATAGTCTTTCAAGTTCTGCAGAAACTAGGATCTCAGATGGTCAAGAATGCCCAAGACATTCAAGAGTACCCATGCATGTATCTGATAACAGCTCCACTAATTCGGAAGAGAATATAATGGTTCCCCATAGTGTCATTTTCAATGATTCTGTAAAGGAGGCATCCCCTGTGGATGTCACTGCATCTCCTGAGAATTGTACCACAGAACAGTGTCCAAATGCTAATTTTTTGGTTAGGTTTGCTGAAGGAGATACAAATATGTCTAAAAAAATAGACCCTATTCATACAGTTGAGACACATTTAAAATCTTCAAGTTCAGATATCGTTGGCATATCTTCAGACCCTATACATACAGTTAGTCTCGCAAATGTGCATACAACTTTAAGTCTGTTGAATGATTCAAGTGTGTCAAAAGTTTTAAATCCATATGTTCAAAGCTCAGATTTTTGCTTACCGTCCAGCACAGGTGGGATTACTGTTTTACATGGGGAAGGGGAGGAGGTTTCAGAGACAGAAATTCGCTATGGAAATAGTGGCAGTAACAGTGCGAGTAGGGCCTCACCATTGTCTCAAATAAATGAAGGCACTACTAGTCACATGAATGTTCCTGTATTGCAAGCTGAACTTAGTGATGCAATTGTGGTTGCCACATCTTGTGCAGAAGTTCCCATTAGTAGCAGTGATAACAAGACACACCAGAAAGCATTGTCAAACACAGTTGAACCTTCTGCTTCTTTTTCTCTGGCTTATCCTGAGAGTAGTGCTAAATTGTACATCGATAGTTTGTTTGGAGGATCTGTTGAGTCTGTAGATGCAAATGCAAATATTCCAACCGATCCAGTGTTGGAAAACGAGCAGATAGAAAAATCTCTTCCGGTTGTGCCTATAAACAACATTCAGAAGGACATTCTGGTTTGTGGAAATATTGAGAGAGGGAAGATTGATATTCAGGATGTTGAAAAATGTGAGTCCAGAGAATTCATAGAAAGATCTCCGAGTGCTAATCTGGGATCCAATGGTCCTCAAACAAAGAATGATTCACCTCTCGAGCATCAATCTCTGTCCTGCACTGCTGATACTGATGCTGTAACAAGTGACTGCAGTACAGTATCAGATATGCTTTCTCCAGGGACCATGCCAGACTTACTTGATAGTAGGACTTCAGATTGTCAAGCAATCCAAGATGAAAGCACTCAAGGGGATGAAGATAATGCGGATAGCAGATCTAAGGTTGAACAGGATTGTGACTTACCTGCTTCTACATCATATTCACATTATAGCACTATAAAGAATAAAAAATCAAGTCCTGAAACCGGACTAGATAACTTGATCACAGGGAAGATAATGCCTCAACCTTTGCAAGTTGATTCCAAAGTTATGACTCAAGGACCGAATTCTTCTTGTTCAGAGTTAAATTTTGGCAAAAATCACTTGGGTTCAGCCATTCCTACTACTTTCCAAGGTCGATCCTACTTAAATTTTCCCAAGTCAAAGACATCTGCTTATTCAACCCAGGTTTCAAAACTTCGAACATGGCATCGTATAGGTAATAATTCTGGTTCTCTACCGGGAAACAAGACTTTGGCAGGATCTGTGCCTCCCAAAAGGTCAATTTCAGAAACAAATGGGAATTTTCAAAATACTTCTTACGTTCGTAAAGGTAACAACAGTATTGTAAGGAAACATACTTCTGTTTCTGCTTCACCACAATGCTCTGCTAATCAGTCTCCTTTGCGGTTTGATGAATTTCAAAAGAGCACTGGAGCTGAAAATATAGTTGAAGTCTCAAATCAACCCAATCTCTTGAAGACAGGATTGACACACGCTCCTCTGGAGAGGCAAAGAACACCTCCGCTTGATACTAAATTACCTGACCATATGGCAACAGCATGTGAGGAGAATAATTTTTCCTCATTAAGAGAACCTCATTCCAATGCTTTCCGTGATAATGCATCTGAACCTGAGCCTAGAAACTTTACAGAGCCTTGTGGTGCTTCAAACTCTGCTGATGATGCCCTGAAGTGGGATGAAACTGTTGAAAATCTAACTGTTCCATCAAACAATGTAGAAAGCCAAGTTGAAGCACATGATGAGAGTGCGTCTTTGAATTCGAAGAAAATTGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAGCTTCAAATTCTTGTGAACTTTCTGTTGGTAAAGATGACTATGCCCAAATGGCCTCTTCTGATGGGTACTTCAAGAGGCGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCCAATCAACCAGACAGTTGCAATGCCCACTGTAAACTCTGATGGGCACAGGGCCTGCAAGGCTAGTTGCAACAAAAGGTTTGGTAAGAGGCGGTCACTGAAAGTTTATAGCTCAGATCCACCGGTAGATTATTTGGTCCTGGGCTGTGCGGTAGTTGATATTGATAATACACCCATGCTAGTTGTTGGAAGGTCATGCAAACCTTTGAGAGCCTCATTGGTGTGGACACTTTGTGGTGCAAGTTCATCGAAAAAGGACAATGACTCTCTGCATCGTCAGAAGGTTCTGCCACACTTGTTTCCATGGAAAAGAGCAACATATTTAAGGAGTTTCATTCATAGTCCTGCTTTGAGCTCTAATACTAATTCATTATCTGCAATCGGGTCAACCCATGGATTTTCCCTCCGGAAATCCAAGGTGTTAGGCGTTGGTGGATATAGTCTAAAATGGTCAAGATCAATTGAGAAGTCTTCAAAGAAAGCTAACGAGCATGCTCTTTATTTTCTGTGTCGCTCTGACTTTAAAAGTGGTGGTCAATTAGGAGAACGTATATTTCGTGTTGGCTCGGTTCGTTACAAAATGGACTCTTCGGGGAGGACACTTCAAAGGATTTCGGATGATGAGTCCGTGCCCTCTGCTTCTCTCCGTTCAGGTTTGCATGTGAAAAGTTCATACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTTCGAATTGGCAATGGTCATCAGCTTATCAGAGACCCAAAGAAGCGAATTCGTATATTGGCTAATGAAAAAATTAGATGGAGTTTACACACAGCAAGACAACGGTTGGCTCGAAAGCAGAAGTATTGTCAATTCTTTACTAGGTTTGGGAAATGTAACAAGGATGATGGGAAGTGTCCCTATATTCATGATCCCTCAAAAATTGCTGTCTGTACTAAGTTTCTGAATGGTTTATGTTCCACCCCCAACTGCAAATTGACTCATAAGATTATTCCCGAGAGAATGCCTGATTGCTCTTATTTTTTGCAAGGTTTATGCACCAACAGAAATTGCCCCTATAGACATGTTAATGTGAACCCTAAGGCATCCGTTTGTGAAGGATTTCTCCGGGGATATTGTGCCGATGGCAATGAGTGCCGGAAGAAGCACACATATGTTTGTCCTACTTTTGAAGCAACAGGAAGCTGTACTCAAGGGACCAAATGCAAACTTCATCACCCAAAAAAGCAAGGCAAGGGAAAGAAAAGGAAGAGATCGATCGATCAGAGGAACTGTAAAAGGAGATACTTTGGTTTGCTAGGGATTGATGTTTCTGAACCGGGTATGATGGTTGTAGCTCCAAGGCAAGGGGAACAGAATAAGGATGACCTTGAAGGAGAACTTACTGACTACATCAGTCTTGATGTTGAGGATGAAGAGGTTGCAGAACTACCAGGACAAAAAAGTGAGCAATTAACATTGTATGATAGTGAATCTGTAGATATAGTATTGGAGGATGATGATGATGAACTCATTAAACCTGTTCTGATAATGAAAAGAGATACTAGGGCGCAGGCATCTCCTGTCTGA 6357 0.4184 MDHPSHFHQHQHQHQHARYAPLPHHHHPHPRHSQFPEDPRFRPHPLPPPPPPPAAPAPALPPPPPSPSLSYRTGRTPPPPHPHPYNNPPHQSLQFNYAHPPIEEERPVHDFTHSQRVSNRMIIDNDRPRQSLPDLDYRIADNRIGGGWNPPRVSSDNRPSRPYPPPIDFDRELHHNHKVAPPYPPIDKVRCNSDGNFRGRVDHIDGYDVNTMVDFAWAGRGDDNYHCRRDFGSNLNESSGDFGIIPRQITSLRDLDSKNRDYVHYGVERDSEISRVNRRDGPGDSKRWVNDRKGTRDPHSSSFEFGNNENGGDGIPVTSRNYYGSELCRYSNRGNRESGHEFSRAPKKQIQKKSALLRIQMAKPNHKNREVEQLQYTSYGDDSNSNSFRGKDHFEHSGFGVKTEERDRSPVELDISFKSNSLVAKAIVAPSSSAVSDVDITSVSDTDFTPAEKGKNGLASDSDSPDLKPAKPSMAAVNLGGSPCKVNRIPSSGKELNLQKKVSDSCSQPCASVTANCHVKNKGAQTPKGVVSHESTNPCSGKTSTRAAKKKKIVKKVVKKVVSNPNLNISHSMPSNMSKGTTKACSVGPSSTSGFDKTSLKEKITADDKMSLPDNLLSSPKEGHLLPGNRKEDISLLGIGPHTSPQEHEVDDNADVGQVDRIERNENISNSSLGAFSTKDEKNDFYCPNAGDFVHDLHSGPSTDKAAEAKSTNGIAFSDISNSDDVNMELCQNEVSPSPQQYSDVQYLDNQFHVEDDMNCRLSASAESVINTDVINTCNSANVSLAFLCSNDLTGNAQKSITVSDFGKDGKIDFKSEALALSESVILEENPESCSPVPSGGVDSLSSSAETRISDGQECPRHSRVPMHVSDNSSTNSEENIMVPHSVIFNDSVKEASPVDVTASPENCTTEQCPNANFLVRFAEGDTNMSKKIDPIHTVETHLKSSSSDIVGISSDPIHTVSLANVHTTLSLLNDSSVSKVLNPYVQSSDFCLPSSTGGITVLHGEGEEVSETEIRYGNSGSNSASRASPLSQINEGTTSHMNVPVLQAELSDAIVVATSCAEVPISSSDNKTHQKALSNTVEPSASFSLAYPESSAKLYIDSLFGGSVESVDANANIPTDPVLENEQIEKSLPVVPINNIQKDILVCGNIERGKIDIQDVEKCESREFIERSPSANLGSNGPQTKNDSPLEHQSLSCTADTDAVTSDCSTVSDMLSPGTMPDLLDSRTSDCQAIQDESTQGDEDNADSRSKVEQDCDLPASTSYSHYSTIKNKKSSPETGLDNLITGKIMPQPLQVDSKVMTQGPNSSCSELNFGKNHLGSAIPTTFQGRSYLNFPKSKTSAYSTQVSKLRTWHRIGNNSGSLPGNKTLAGSVPPKRSISETNGNFQNTSYVRKGNNSIVRKHTSVSASPQCSANQSPLRFDEFQKSTGAENIVEVSNQPNLLKTGLTHAPLERQRTPPLDTKLPDHMATACEENNFSSLREPHSNAFRDNASEPEPRNFTEPCGASNSADDALKWDETVENLTVPSNNVESQVEAHDESASLNSKKIVYVKRKSNQLVAASNSCELSVGKDDYAQMASSDGYFKRRKNQLVRTTFESPINQTVAMPTVNSDGHRACKASCNKRFGKRRSLKVYSSDPPVDYLVLGCAVVDIDNTPMLVVGRSCKPLRASLVWTLCGASSSKKDNDSLHRQKVLPHLFPWKRATYLRSFIHSPALSSNTNSLSAIGSTHGFSLRKSKVLGVGGYSLKWSRSIEKSSKKANEHALYFLCRSDFKSGGQLGERIFRVGSVRYKMDSSGRTLQRISDDESVPSASLRSGLHVKSSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRIRILANEKIRWSLHTARQRLARKQKYCQFFTRFGKCNKDDGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKIIPERMPDCSYFLQGLCTNRNCPYRHVNVNPKASVCEGFLRGYCADGNECRKKHTYVCPTFEATGSCTQGTKCKLHHPKKQGKGKKRKRSIDQRNCKRRYFGLLGIDVSEPGMMVVAPRQGEQNKDDLEGELTDYISLDVEDEEVAELPGQKSEQLTLYDSESVDIVLEDDDDELIKPVLIMKRDTRAQASPV 2118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2419 2118 PANTHER CCCH ZINGC FINGER 336 2110 - -
Mibi08g2419 2118 SMART c3hfinal6 1955 1981 IPR000571 GO:0046872
Mibi08g2419 2118 SMART c3hfinal6 1902 1926 IPR000571 GO:0046872
Mibi08g2419 2118 SMART c3hfinal6 1873 1901 IPR000571 GO:0046872
Mibi08g2419 2118 SMART c3hfinal6 1982 2004 IPR000571 GO:0046872
Mibi08g2419 2118 SMART c3hfinal6 1928 1953 IPR000571 GO:0046872
Mibi08g2419 2118 FunFam zinc finger CCCH domain-containing protein 3 1903 1954 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 830 877 - -
Mibi08g2419 2118 Gene3D - 1901 1954 - -
Mibi08g2419 2118 ProSiteProfiles Zinc finger C3H1-type profile. 1955 1982 IPR000571 GO:0046872
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1172 1203 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 528 544 - -
Mibi08g2419 2118 ProSiteProfiles Zinc finger C3H1-type profile. 1873 1902 IPR000571 GO:0046872
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 300 315 - -
Mibi08g2419 2118 FunFam Zinc finger CCCH domain-containing protein 7 1956 2017 - -
Mibi08g2419 2118 Gene3D - 1955 2017 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 566 597 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1482 1511 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 9 30 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 837 854 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1173 1203 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 40 87 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 444 470 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 274 299 - -
Mibi08g2419 2118 ProSiteProfiles Zinc finger C3H1-type profile. 1928 1954 IPR000571 GO:0046872
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1236 1255 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 274 318 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1359 1392 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 524 550 - -
Mibi08g2419 2118 MobiDBLite consensus disorder prediction 1 95 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi08g2419 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2419 08 41952107 41960796 Mibi08g2419 08 41952107 41960796 ECH