Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2418 ATGATGAAAGTGGGCCTTGCCGGAGAAGGAAGCGACGGCAAATCAAGCGGCAGTACGGTGGTGGTGGGAGTGAAGTTGGATTCTCACAGCAAGGAGTTGCTGACGTGGGCTTTAGTTAAGGTTGCTCAGCCTGGTGATATTGTCGTTGCTCTTCATGTTCTTGGGGACGATGAAATTGTGAACCGAGACGGTAAGGCGTCGCTTCTTTCATTGGTAACAGCATTTGACTCTGTTCTTGCTGTTTACGAAGGTTTTTGCAATTTGAAACAGGTGGATCTAAAACTCAAAATCTGCAGAGGCTCTTCAGTCAGGAAAATCTTAGTTCGAGAAGCAAATGCCTATTCTGCAACTCATATTTTAGTGGGAACTTCTCAAGGCATTCATAAATTGCGAACATCTACCTCCGTAGCTAAGTACTGTGCTAAGAAGCTATCCAAGGACTGCTGGGTTATTGCTGTCAATAACGGAAAAGTTGTGTTCAAGAGAGAAGGCTCATGTGCAGCTCCTCTTGACTTGCAAGGAATTGATAGTCGTGGTAGAAATGGCTTGCTTGCTTCAATTCACCGGACATTCAGTTCTAGTTCCAAAGTACTCAACGATGACAGCACAGGAATGATTGATAAGGCCACTTGTAAAATCTCGGATAACAGCTTAGCGAAGGTCTTTCTTGATTCTACAGAAACCGTTCAGAAACGAAGCTGCTCACTTTGTGGTCCAGCACATGCATTGCCAAATTCTGCTAGCAACGAAGCTGCAGAAGAGTCTTCTGGTGATAGTGACAAGGAGAATTCTATGTCTATAGTGCTTGCACAGACGACTACAGAGACAGCATCAAGTGCCAGGGTTGGATCAGCCAGAGAATTACCTGAACTAAAACCTGGTTGGCCATTACTACACCGGTCAATTTCATCTGGCCGGCAATCTCCTGTCAGGTCATTGGTGCGCCAGATCTCAGTGGTTCAGTGGGCAATGCAGTTGCCAAGTAGAAATCTTTCATATGATGGGGATCATGTTCACAGACCAGCCAGTTCTGTTCCAGATCATCATCAATCTTTGGCTTTAGATAGCAAGAGCGGTGCTATTGTTCCAGTAAATGCTCAAATAGGGATTGCCTCTTCTCCTGACCATAATTCAAGGAGGATTCCTAAAGAATTGGAGGGTCTTCCTGAGAAATACTCATCAACCTGCAGATTGTTTCAGTATCAAGAACTTTTATTGGCTACGTCAAATTTCTCCCCTGAAAATTTGATCGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGCTATCTTCCTGATGGCAAGGAACTGGCAGTTAAGATCTTAAAGCCCTCTGATGATGTTTTGAAGGAGTTTCTTTTAGAAATAGAAATTATCACTACCTTGCACCACAAAAACATTATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAGTCTTCTTTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATCCACTTGTGTTTAGTTGGACCGAGAGGTACAAGGTGGCAGTTGGTGTTGCTGAGGCTCTGGATTATCTGCATAGTAGAGATGCTAAACGTGTGATTCACAGGGACGTAAAGTCATCAAATGTATTATTGTCTGAGGATTTTGAACCCCAGCTATCTGATTTTGGGCTTGCTAAATGGGCATCGACCTCATCATCTCATATAACATGCACAGACGTTGCCGGGACCTTTGGCTACTTGGCTCCAGAGTATTTTATGTATGGCAAAGTAAATGCTAAGATTGATGTCTACGCATTTGGAGTCGTGCTCCTTGAGCTTCTAACAGGAAGAAAGCCCATAAGTGGGGATTATCCTAAAGGTCAAGAGAGTCTCGTCATGTGGGCAAGTCCAATTCTTCATAGTGGAAAAGCTGCACAATTATTGGATCCAAGTCTGAGAAGTAACTACGATCAGGACCAGATGGAGAGGATGGTCTTGGCAGCCTCGCTTTGCATCAGACGTGCTCCGAGAGCTAGGCCTCAAATGAACCTTGTCACAAAACTTCTTCAAGGTGATGGTGATGTAATTAAGTGGGCAAGGTTGGAAGTTAACGCTTCTAAGGCAATAGAAACGCAAAATGATAAAGCTTGTCCACCTTCTAATTTACAGTCACATCTCAATCTAGCATTCCTTGATGTGGAGGATGACTCTCTTTCCATGTGCAGTATTGAGCAAAATGTATCGTTAGAGGACTACTTGAAAGGCAGATGGAGCCGCTCATCGAGCTTTGATTGA 2274 0.4389 MMKVGLAGEGSDGKSSGSTVVVGVKLDSHSKELLTWALVKVAQPGDIVVALHVLGDDEIVNRDGKASLLSLVTAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHILVGTSQGIHKLRTSTSVAKYCAKKLSKDCWVIAVNNGKVVFKREGSCAAPLDLQGIDSRGRNGLLASIHRTFSSSSKVLNDDSTGMIDKATCKISDNSLAKVFLDSTETVQKRSCSLCGPAHALPNSASNEAAEESSGDSDKENSMSIVLAQTTTETASSARVGSARELPELKPGWPLLHRSISSGRQSPVRSLVRQISVVQWAMQLPSRNLSYDGDHVHRPASSVPDHHQSLALDSKSGAIVPVNAQIGIASSPDHNSRRIPKELEGLPEKYSSTCRLFQYQELLLATSNFSPENLIGEGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCIEDGSLLLVYDFLSRGSLEEILHGSKKNPLVFSWTERYKVAVGVAEALDYLHSRDAKRVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISGDYPKGQESLVMWASPILHSGKAAQLLDPSLRSNYDQDQMERMVLAASLCIRRAPRARPQMNLVTKLLQGDGDVIKWARLEVNASKAIETQNDKACPPSNLQSHLNLAFLDVEDDSLSMCSIEQNVSLEDYLKGRWSRSSSFD 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2418 757 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 380 485 - -
Mibi08g2418 757 SMART serkin_6 411 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2418 757 CDD USP_Like 19 151 - -
Mibi08g2418 757 PANTHER OS08G0249100 PROTEIN 176 696 - -
Mibi08g2418 757 ProSiteProfiles Protein kinase domain profile. 411 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2418 757 Gene3D Transferase(Phosphotransferase) domain 1 486 698 - -
Mibi08g2418 757 Gene3D Phosphorylase Kinase; domain 1 377 485 - -
Mibi08g2418 757 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 151 - -
Mibi08g2418 757 Gene3D HUPs 17 154 IPR014729 -
Mibi08g2418 757 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Mibi08g2418 757 FunFam Putative receptor-like serine/threonine-protein kinase 486 698 - -
Mibi08g2418 757 Pfam Protein kinase domain 414 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2418 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Mibi08g2418 757 CDD STKc_IRAK 417 684 - -
Mibi08g2418 757 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 17 154 - -
Mibi08g2418 757 SUPERFAMILY Protein kinase-like (PK-like) 392 680 IPR011009 -
Mibi08g2418 757 Pfam Universal stress protein family 19 151 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2418 Mibi-ChrMibi08 41944014 41947411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2418 399 688 Trihelix Transcription Factor Family AT1G70460 45.424 1.73e-79 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi08g2418 Pkinase 6.6e-45 CL0016